Variant report

Variant	rs72946374
Chromosome Location	chr1:84929903-84929904
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11809752	1.00[AMR][1000 genomes]
rs4907075	1.00[ASN][1000 genomes]
rs57249159	1.00[AMR][1000 genomes]
rs57450857	1.00[AMR][1000 genomes]
rs59742045	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72942047	1.00[AMR][1000 genomes]
rs72942059	1.00[AMR][1000 genomes]
rs72942078	1.00[AMR][1000 genomes]
rs72942082	1.00[AMR][1000 genomes]
rs72942100	1.00[AMR][1000 genomes]
rs72943903	1.00[AMR][1000 genomes]
rs72943915	1.00[AMR][1000 genomes]
rs72943959	1.00[AMR][1000 genomes]
rs72946340	1.00[AMR][1000 genomes]
rs72946347	1.00[AMR][1000 genomes]
rs72948407	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72948417	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72948425	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72948447	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830437	chr1:84837524-85001269	Flanking Active TSS Active TSS Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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