Variant report

Variant	rs72946642
Chromosome Location	chr11:83231723-83231724
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs12288797	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3425818	chr11:83231572-83231804	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs72946642	CCDC90B	cis	Artery Tibial	GTEx

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83222200-83231800	Weak transcription	Brain Anterior Caudate	brain
2	chr11:83229800-83236600	Weak transcription	Pancreas	Pancrea
3	chr11:83231400-83233400	Enhancers	Brain Angular Gyrus	brain
4	chr11:83231600-83232600	Enhancers	Brain Inferior Temporal Lobe	brain
5	chr11:83231600-83233000	Enhancers	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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