The 2.0 version of rSNPBase

Variant report

Variant rs72952422
Chromosome Location chr3:112076303-112076304
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:112053200-112076400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr3:112054800-112076800 Weak transcription Lung lung
3 chr3:112054800-112083000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr3:112055600-112080200 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr3:112055800-112076400 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr3:112056600-112076400 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr3:112061200-112083000 Weak transcription Colonic Mucosa Colon
8 chr3:112062400-112083000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr3:112062600-112076600 Strong transcription Primary B cells from cord blood blood
10 chr3:112064000-112076800 Weak transcription Left Ventricle heart
11 chr3:112064200-112076800 Strong transcription Placenta Placenta
12 chr3:112064400-112076800 Strong transcription Primary hematopoietic stem cells short term culture blood
13 chr3:112064800-112077200 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr3:112065600-112079600 Weak transcription Fetal Intestine Large intestine
15 chr3:112066000-112089800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr3:112066800-112076800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr3:112066800-112076800 Weak transcription Ovary ovary
18 chr3:112066800-112077000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr3:112067000-112079400 Weak transcription Rectal Smooth Muscle rectum
20 chr3:112067200-112076800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr3:112067200-112079800 Weak transcription Fetal Stomach stomach
22 chr3:112067200-112080400 Weak transcription Fetal Muscle Trunk muscle
23 chr3:112067400-112076800 Weak transcription Aorta Aorta
24 chr3:112069200-112076800 Weak transcription Thymus Thymus
25 chr3:112069200-112084000 Weak transcription Fetal Kidney kidney
26 chr3:112069200-112095400 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr3:112070200-112086200 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr3:112070600-112080400 Weak transcription Brain Angular Gyrus brain
29 chr3:112070600-112080400 Weak transcription Brain Anterior Caudate brain
30 chr3:112070600-112086200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr3:112070600-112088800 Weak transcription Brain Cingulate Gyrus brain
32 chr3:112070800-112079600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr3:112070800-112084600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr3:112070800-112090600 Weak transcription Brain Hippocampus Middle brain
35 chr3:112071000-112076800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr3:112071000-112077600 Weak transcription Fetal Muscle Leg muscle
37 chr3:112071000-112083000 Weak transcription Brain Substantia Nigra brain
38 chr3:112071200-112076400 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr3:112071200-112083800 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr3:112071800-112079400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr3:112072000-112080600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr3:112072400-112080400 Weak transcription Fetal Brain Male brain
43 chr3:112073000-112076400 Weak transcription Primary T cells from cord blood blood
44 chr3:112073000-112080400 Weak transcription Brain Inferior Temporal Lobe brain
45 chr3:112073200-112076800 Weak transcription Fetal Brain Female brain
46 chr3:112073200-112077000 Weak transcription Small Intestine intestine
47 chr3:112073400-112076400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr3:112073400-112079600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr3:112073600-112076800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr3:112074200-112076400 Weak transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015