The 2.0 version of rSNPBase

Variant report

Variant rs72960671
Chromosome Location chr2:180834448-180834449
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:180801000-180836400 Weak transcription Psoas Muscle Psoas
2 chr2:180803400-180843600 Weak transcription Fetal Brain Male brain
3 chr2:180807000-180858400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr2:180808200-180840000 Strong transcription Primary monocytes fromperipheralblood blood
5 chr2:180808200-180860400 Weak transcription Placenta Amnion Placenta Amnion
6 chr2:180809000-180856000 Weak transcription Fetal Stomach stomach
7 chr2:180809400-180871000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr2:180811200-180856200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr2:180813400-180868200 Weak transcription Stomach Mucosa stomach
10 chr2:180816600-180847200 Weak transcription Hela-S3 cervix
11 chr2:180816800-180835400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr2:180816800-180841800 Weak transcription Small Intestine intestine
13 chr2:180816800-180852800 Weak transcription Lung lung
14 chr2:180816800-180860400 Weak transcription Right Ventricle heart
15 chr2:180816800-180868400 Weak transcription Pancreas Pancrea
16 chr2:180816800-180869000 Weak transcription Spleen Spleen
17 chr2:180816800-180870600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr2:180817200-180860400 Weak transcription Aorta Aorta
19 chr2:180817200-180860400 Weak transcription Gastric stomach
20 chr2:180817800-180848400 Weak transcription NHLF lung
21 chr2:180819000-180834600 Weak transcription Brain Substantia Nigra brain
22 chr2:180819000-180845800 Weak transcription Brain Inferior Temporal Lobe brain
23 chr2:180819000-180871000 Weak transcription Esophagus oesophagus
24 chr2:180819200-180844400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr2:180819600-180843800 Weak transcription Colon Smooth Muscle Colon
26 chr2:180819800-180834800 Weak transcription Colonic Mucosa Colon
27 chr2:180821600-180858800 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr2:180822000-180839200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr2:180822000-180853600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr2:180822200-180838400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr2:180822200-180858200 Strong transcription Primary T cells fromperipheralblood blood
32 chr2:180822400-180836800 Strong transcription Rectal Mucosa Donor 29 rectum
33 chr2:180822400-180838600 Strong transcription Liver Liver
34 chr2:180823400-180870600 Weak transcription Fetal Intestine Small intestine
35 chr2:180826200-180840000 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr2:180826200-180853200 Strong transcription Primary T helper cells PMA-I stimulated --
37 chr2:180826600-180838600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr2:180826600-180838800 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr2:180827200-180853400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr2:180827800-180835200 Strong transcription GM12878-XiMat blood
41 chr2:180828200-180838800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr2:180828400-180836800 Strong transcription Primary T cells from cord blood blood
43 chr2:180828400-180838400 Strong transcription HepG2 liver
44 chr2:180828600-180839200 Strong transcription K562 blood
45 chr2:180829200-180837200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr2:180829400-180840000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr2:180829400-180846400 Weak transcription HMEC breast
48 chr2:180829400-180856000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr2:180829600-180871200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr2:180829800-180834600 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015