The 2.0 version of rSNPBase

Variant report

Variant rs9989852
Chromosome Location chr2:180839707-180839708
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:180803400-180843600 Weak transcription Fetal Brain Male brain
2 chr2:180807000-180858400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr2:180808200-180840000 Strong transcription Primary monocytes fromperipheralblood blood
4 chr2:180808200-180860400 Weak transcription Placenta Amnion Placenta Amnion
5 chr2:180809000-180856000 Weak transcription Fetal Stomach stomach
6 chr2:180809400-180871000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:180811200-180856200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr2:180813400-180868200 Weak transcription Stomach Mucosa stomach
9 chr2:180816600-180847200 Weak transcription Hela-S3 cervix
10 chr2:180816800-180841800 Weak transcription Small Intestine intestine
11 chr2:180816800-180852800 Weak transcription Lung lung
12 chr2:180816800-180860400 Weak transcription Right Ventricle heart
13 chr2:180816800-180868400 Weak transcription Pancreas Pancrea
14 chr2:180816800-180869000 Weak transcription Spleen Spleen
15 chr2:180816800-180870600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr2:180817200-180860400 Weak transcription Aorta Aorta
17 chr2:180817200-180860400 Weak transcription Gastric stomach
18 chr2:180817800-180848400 Weak transcription NHLF lung
19 chr2:180819000-180845800 Weak transcription Brain Inferior Temporal Lobe brain
20 chr2:180819000-180871000 Weak transcription Esophagus oesophagus
21 chr2:180819200-180844400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr2:180819600-180843800 Weak transcription Colon Smooth Muscle Colon
23 chr2:180821600-180858800 Strong transcription Monocytes-CD14+_RO01746 blood
24 chr2:180822000-180853600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr2:180822200-180858200 Strong transcription Primary T cells fromperipheralblood blood
26 chr2:180823400-180870600 Weak transcription Fetal Intestine Small intestine
27 chr2:180826200-180840000 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr2:180826200-180853200 Strong transcription Primary T helper cells PMA-I stimulated --
29 chr2:180827200-180853400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr2:180829400-180840000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr2:180829400-180846400 Weak transcription HMEC breast
32 chr2:180829400-180856000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr2:180829600-180871200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr2:180830200-180857600 Weak transcription Fetal Heart heart
35 chr2:180830600-180846200 Weak transcription Brain Cingulate Gyrus brain
36 chr2:180830600-180848400 Weak transcription Fetal Brain Female brain
37 chr2:180830800-180855200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr2:180830800-180871000 Weak transcription ES-WA7 Cell Line embryonic stem cell
39 chr2:180831000-180844200 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr2:180831000-180845800 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr2:180831000-180848600 Weak transcription Brain Angular Gyrus brain
42 chr2:180831000-180855800 Weak transcription Thymus Thymus
43 chr2:180831000-180856000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr2:180831000-180860400 Weak transcription H9 Cell Line embryonic stem cell
45 chr2:180832200-180840200 Weak transcription Ovary ovary
46 chr2:180832200-180853600 Strong transcription Primary B cells from peripheral blood blood
47 chr2:180832400-180848000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr2:180832400-180855800 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr2:180832800-180848000 Weak transcription HSMMtube muscle
50 chr2:180832800-180860200 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015