The 2.0 version of rSNPBase

Variant report

Variant rs72965386
Chromosome Location chr3:53122225-53122226
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:53107400-53123200 Weak transcription Lung lung
2 chr3:53107600-53123200 Weak transcription Right Ventricle heart
3 chr3:53107600-53123400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr3:53107600-53133600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr3:53107800-53123000 Weak transcription Placenta Placenta
6 chr3:53107800-53123200 Weak transcription Primary hematopoietic stem cells blood
7 chr3:53107800-53123200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr3:53107800-53123600 Weak transcription Brain Germinal Matrix brain
9 chr3:53107800-53123800 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr3:53107800-53126000 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr3:53107800-53134000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr3:53107800-53151400 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr3:53108000-53123200 Weak transcription Primary T cells fromperipheralblood blood
14 chr3:53108000-53123200 Weak transcription Colonic Mucosa Colon
15 chr3:53108000-53123200 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr3:53108000-53123400 Weak transcription Adipose Nuclei Adipose
17 chr3:53108000-53123800 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr3:53108200-53123400 Weak transcription GM12878-XiMat blood
19 chr3:53109200-53123200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr3:53109600-53123600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr3:53116200-53123600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr3:53117600-53130800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
23 chr3:53117800-53123200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr3:53117800-53147200 Weak transcription Psoas Muscle Psoas
25 chr3:53118000-53125200 Weak transcription Colon Smooth Muscle Colon
26 chr3:53118000-53125400 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr3:53118200-53123200 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr3:53118200-53123400 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr3:53118200-53123600 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr3:53118200-53123800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr3:53118200-53129800 Weak transcription Fetal Brain Male brain
32 chr3:53118400-53123200 Weak transcription Muscle Satellite Cultured Cells --
33 chr3:53118400-53123200 Weak transcription Duodenum Mucosa Duodenum
34 chr3:53118400-53123200 Weak transcription Rectal Smooth Muscle rectum
35 chr3:53118400-53123400 Weak transcription Fetal Brain Female brain
36 chr3:53118400-53123800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr3:53118400-53125200 Strong transcription Primary monocytes fromperipheralblood blood
38 chr3:53118600-53123200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr3:53118600-53124200 Weak transcription HSMMtube muscle
40 chr3:53118600-53135200 Weak transcription NH-A brain
41 chr3:53118800-53123400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr3:53118800-53123600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr3:53118800-53123600 Weak transcription Brain Cingulate Gyrus brain
44 chr3:53118800-53123800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr3:53118800-53123800 Weak transcription Brain Anterior Caudate brain
46 chr3:53118800-53123800 Weak transcription Brain Substantia Nigra brain
47 chr3:53118800-53124000 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr3:53118800-53124600 Weak transcription Osteobl bone
49 chr3:53118800-53125000 Weak transcription NHLF lung
50 chr3:53118800-53125800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015