Variant report

Variant	rs72973754
Chromosome Location	chr6:128274497-128274498
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs72973315	1.00[AFR][1000 genomes]
rs72973772	1.00[AFR][1000 genomes]
rs72975931	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1849854	chr6:128143774-128287313	Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv1024516	chr6:128184182-128298278	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:128270600-128293400	Weak transcription	Fetal Muscle Leg	muscle
2	chr6:128271400-128275400	Enhancers	Fetal Thymus	thymus
3	chr6:128272400-128292600	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr6:128273000-128276400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
5	chr6:128273000-128276600	Enhancers	Primary T helper cells fromperipheralblood	blood
6	chr6:128273200-128275600	Enhancers	Primary T cells fromperipheralblood	blood
7	chr6:128273200-128276400	Enhancers	Primary T helper cells PMA-I stimulated	--
8	chr6:128273200-128276800	Enhancers	Primary T cells from cord blood	blood
9	chr6:128273200-128277000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
10	chr6:128273400-128276600	Enhancers	Primary T helper naive cells from peripheral blood	blood
11	chr6:128273400-128276600	Enhancers	Primary T killer memory cells from peripheral blood	blood
12	chr6:128273400-128276800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
13	chr6:128273400-128277400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
14	chr6:128274400-128277400	Weak transcription	Thymus	Thymus

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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