The 2.0 version of rSNPBase

Variant report

Variant rs72977485
Chromosome Location chr11:72615727-72615728
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:72540200-72616600 Strong transcription Primary B cells from peripheral blood blood
2 chr11:72577200-72651600 Weak transcription Gastric stomach
3 chr11:72581800-72619600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr11:72582600-72622000 Weak transcription Fetal Heart heart
5 chr11:72593200-72616200 Strong transcription Primary B cells from cord blood blood
6 chr11:72594200-72619400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr11:72597200-72634200 Weak transcription NHLF lung
8 chr11:72597600-72617600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr11:72599400-72632400 Weak transcription HUVEC blood vessel
10 chr11:72600800-72623600 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr11:72600800-72632600 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr11:72600800-72653200 Weak transcription Lung lung
13 chr11:72601000-72620800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr11:72601000-72624000 Weak transcription Thymus Thymus
15 chr11:72601000-72636800 Weak transcription Spleen Spleen
16 chr11:72601000-72641200 Weak transcription HSMMtube muscle
17 chr11:72601200-72616400 Weak transcription Adipose Nuclei Adipose
18 chr11:72601200-72616600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr11:72601200-72617400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr11:72601200-72617600 Weak transcription Brain Hippocampus Middle brain
21 chr11:72601200-72617600 Weak transcription Fetal Muscle Leg muscle
22 chr11:72601200-72617800 Weak transcription Fetal Lung lung
23 chr11:72601200-72619800 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr11:72601200-72622800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr11:72601200-72623200 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr11:72601200-72623600 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr11:72601200-72636000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr11:72601400-72616200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr11:72601400-72619400 Weak transcription Dnd41 blood
30 chr11:72601400-72632400 Weak transcription Ovary ovary
31 chr11:72601800-72636000 Weak transcription Osteobl bone
32 chr11:72602200-72636800 Weak transcription Left Ventricle heart
33 chr11:72605600-72624000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr11:72607000-72643000 Weak transcription HSMM muscle
35 chr11:72607600-72620000 Weak transcription Placenta Placenta
36 chr11:72608800-72623600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr11:72609800-72617600 Weak transcription Primary T cells fromperipheralblood blood
38 chr11:72611600-72622400 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr11:72611800-72623000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr11:72612400-72649000 Weak transcription Aorta Aorta
41 chr11:72612800-72617600 Weak transcription Primary hematopoietic stem cells blood
42 chr11:72613400-72615800 Enhancers iPS-15b Cell Line embryonic stem cell
43 chr11:72613800-72616000 Weak transcription Fetal Thymus thymus
44 chr11:72613800-72617400 Weak transcription Primary monocytes fromperipheralblood blood
45 chr11:72613800-72617800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr11:72614200-72616600 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr11:72614200-72640400 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr11:72614600-72616200 Enhancers HUES48 Cell Line embryonic stem cell
49 chr11:72614800-72616000 Enhancers HUES64 Cell Line embryonic stem cell
50 chr11:72614800-72616200 Genic enhancers HepG2 liver

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Last update: Aug 31, 2015