The 2.0 version of rSNPBase

Variant report

Variant rs72978743
Chromosome Location chr3:136679489-136679490
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:136656400-136681400 Weak transcription Fetal Muscle Leg muscle
2 chr3:136665200-136680200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr3:136665400-136680200 Weak transcription Primary T cells fromperipheralblood blood
4 chr3:136665400-136680200 Weak transcription Fetal Muscle Trunk muscle
5 chr3:136665600-136680000 Weak transcription Dnd41 blood
6 chr3:136665600-136689400 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr3:136666600-136680400 Weak transcription Left Ventricle heart
8 chr3:136669400-136680200 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr3:136673800-136680400 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr3:136674000-136680200 Weak transcription Fetal Thymus thymus
11 chr3:136674200-136679800 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr3:136674200-136680200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr3:136674600-136680000 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr3:136674800-136680200 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr3:136675000-136679800 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr3:136675600-136679600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr3:136675600-136679800 Weak transcription Osteobl bone
18 chr3:136675600-136681200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr3:136675800-136679600 Weak transcription HSMM muscle
20 chr3:136676200-136679600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr3:136676200-136680200 Weak transcription HepG2 liver
22 chr3:136677000-136679600 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr3:136677000-136679600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr3:136677000-136679800 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr3:136677000-136679800 Weak transcription NHLF lung
26 chr3:136677200-136679600 Transcr. at gene 5' and 3' NHEK skin
27 chr3:136677200-136680600 Enhancers NHDF-Ad bronchial
28 chr3:136677800-136679800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr3:136677800-136679800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr3:136679000-136680400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr3:136679200-136679600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr3:136679200-136679800 Enhancers A549 lung
33 chr3:136679200-136680600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr3:136679400-136679600 Flanking Active TSS HMEC breast
35 chr3:136679400-136679800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr3:136679400-136680200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr3:136679400-136680400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr3:136679400-136680400 Flanking Active TSS Hela-S3 cervix
39 chr3:136679400-136680600 Enhancers Muscle Satellite Cultured Cells --
40 chr3:136679400-136680800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015