The 2.0 version of rSNPBase

Variant report

Variant rs73020006
Chromosome Location chr2:148607382-148607383
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:148604000-148612600 Weak transcription Gastric stomach
2 chr2:148604000-148620000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr2:148604600-148607600 Weak transcription Brain Hippocampus Middle brain
4 chr2:148604600-148607600 Weak transcription Ovary ovary
5 chr2:148604600-148607600 Weak transcription Placenta Amnion Placenta Amnion
6 chr2:148604600-148608400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr2:148604600-148608600 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr2:148604600-148608800 Weak transcription Stomach Smooth Muscle stomach
9 chr2:148604600-148610000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr2:148604600-148610000 Weak transcription NHDF-Ad bronchial
11 chr2:148604600-148612400 Weak transcription H9 Cell Line embryonic stem cell
12 chr2:148604600-148612400 Weak transcription Left Ventricle heart
13 chr2:148604600-148612400 Weak transcription Right Ventricle heart
14 chr2:148604600-148612600 Weak transcription Pancreas Pancrea
15 chr2:148604600-148614600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr2:148604600-148616400 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr2:148604600-148617200 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr2:148604600-148617600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr2:148604600-148617600 Weak transcription HSMM muscle
20 chr2:148604800-148608400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr2:148604800-148609000 Weak transcription Duodenum Mucosa Duodenum
22 chr2:148604800-148612800 Weak transcription Right Atrium heart
23 chr2:148605000-148608000 Enhancers Fetal Brain Male brain
24 chr2:148605200-148608600 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr2:148605600-148612800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr2:148605600-148613200 Enhancers HepG2 liver
27 chr2:148605600-148614600 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr2:148606000-148607800 Weak transcription Liver Liver
29 chr2:148606000-148612200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr2:148606000-148614200 Weak transcription Brain Germinal Matrix brain
31 chr2:148606000-148614600 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr2:148606000-148620800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr2:148606000-148627600 Weak transcription Brain Angular Gyrus brain
34 chr2:148606200-148607400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr2:148606200-148607600 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr2:148606200-148607600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr2:148606200-148607600 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr2:148606200-148607600 Weak transcription HMEC breast
39 chr2:148606200-148607800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr2:148606200-148608400 Weak transcription HSMMtube muscle
41 chr2:148606200-148608600 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr2:148606200-148609000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr2:148606200-148620800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr2:148606400-148607600 Weak transcription Adipose Nuclei Adipose
45 chr2:148606400-148607800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr2:148606400-148609000 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr2:148606600-148607400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr2:148607000-148608200 Enhancers Breast Myoepithelial Primary Cells Breast
49 chr2:148607200-148607400 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr2:148607200-148607400 Enhancers Fetal Brain Female brain

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Last update: Aug 31, 2015