Variant report

Variant	rs73043470
Chromosome Location	chr2:191622911-191622912
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10171621	1.00[EUR][1000 genomes]
rs10191962	1.00[EUR][1000 genomes]
rs10201787	1.00[EUR][1000 genomes]
rs16832940	1.00[EUR][1000 genomes]
rs41363648	1.00[EUR][1000 genomes]
rs41381545	1.00[EUR][1000 genomes]
rs41457850	1.00[EUR][1000 genomes]
rs41508653	1.00[EUR][1000 genomes]
rs45582434	1.00[EUR][1000 genomes]
rs45625838	1.00[EUR][1000 genomes]
rs56722217	1.00[EUR][1000 genomes]
rs57478729	1.00[EUR][1000 genomes]
rs58801716	1.00[EUR][1000 genomes]
rs60491063	1.00[EUR][1000 genomes]
rs60582710	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61276563	1.00[EUR][1000 genomes]
rs6434403	1.00[EUR][1000 genomes]
rs6712504	1.00[EUR][1000 genomes]
rs6721631	1.00[EUR][1000 genomes]
rs73057796	1.00[EUR][1000 genomes]
rs73057800	1.00[EUR][1000 genomes]
rs7579190	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834492	chr2:191438864-191646621	Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
2	nsv875622	chr2:191618824-191745389	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:191612400-191624600	Weak transcription	HSMMtube	muscle
2	chr2:191612400-191630200	Weak transcription	NHLF	lung
3	chr2:191612600-191624800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr2:191613400-191624400	Weak transcription	NHDF-Ad	bronchial
5	chr2:191621000-191624000	Weak transcription	K562	blood
6	chr2:191621200-191624000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr2:191621200-191624200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr2:191621600-191626800	Weak transcription	Fetal Heart	heart
9	chr2:191622200-191623400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr2:191622400-191631200	Weak transcription	Esophagus	oesophagus
11	chr2:191622600-191624200	Weak transcription	Osteobl	bone
12	chr2:191622800-191624200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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