Variant report

Variant	rs73046713
Chromosome Location	chr1:184498865-184498866
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:184494809..184499031-chr1:184500244..184503419,3	MCF-7	breast:
2	chr1:184491617..184495454-chr1:184495867..184499341,4	K562	blood:
3	chr1:184498410..184500025-chr1:184504648..184506680,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs34427261	0.92[AFR][1000 genomes]
rs35414247	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530079	chr1:183797938-184639971	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
2	esv2756618	chr1:184393343-184674343	Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:184456400-184502200	Weak transcription	Fetal Muscle Trunk	muscle
2	chr1:184461600-184502800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr1:184474400-184505400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:184477400-184502200	Weak transcription	Primary hematopoietic stem cells	blood
5	chr1:184478400-184505200	Weak transcription	Fetal Intestine Small	intestine
6	chr1:184478600-184501200	Weak transcription	Fetal Heart	heart
7	chr1:184478800-184502200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr1:184480200-184505200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr1:184480600-184501400	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr1:184481400-184504000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr1:184483400-184504000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr1:184483800-184500800	Weak transcription	Left Ventricle	heart
13	chr1:184484000-184503000	Weak transcription	NHDF-Ad	bronchial
14	chr1:184484000-184504000	Weak transcription	NHLF	lung
15	chr1:184485800-184504400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr1:184486800-184505400	Weak transcription	Fetal Intestine Large	intestine
17	chr1:184489800-184503800	Weak transcription	HSMMtube	muscle
18	chr1:184489800-184505400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr1:184492200-184500600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr1:184492200-184502800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr1:184492800-184501800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr1:184495000-184504000	Weak transcription	Ovary	ovary
23	chr1:184495400-184500200	Weak transcription	Rectal Smooth Muscle	rectum
24	chr1:184496600-184501400	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr1:184496800-184500800	Weak transcription	Psoas Muscle	Psoas
26	chr1:184497000-184501600	Weak transcription	Skeletal Muscle Female	skeletal muscle

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