The 2.0 version of rSNPBase

Variant report

Variant rs34427261
Chromosome Location chr1:184522755-184522756
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184502600-184527200 Weak transcription Fetal Brain Female brain
2 chr1:184505800-184524000 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr1:184505800-184530800 Weak transcription Rectal Smooth Muscle rectum
4 chr1:184505800-184531600 Weak transcription Fetal Stomach stomach
5 chr1:184511400-184530400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr1:184511800-184524600 Weak transcription Colon Smooth Muscle Colon
7 chr1:184512200-184524200 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr1:184512200-184524400 Weak transcription Fetal Muscle Leg muscle
9 chr1:184512200-184530200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:184512200-184543600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:184512400-184530200 Weak transcription Stomach Smooth Muscle stomach
12 chr1:184514400-184543800 Weak transcription H1 Cell Line embryonic stem cell
13 chr1:184515200-184524000 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:184515200-184531200 Weak transcription NHLF lung
15 chr1:184516000-184524200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:184516200-184524400 Weak transcription Fetal Muscle Trunk muscle
17 chr1:184516400-184522800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:184516400-184523000 Weak transcription HMEC breast
19 chr1:184516400-184524400 Weak transcription Adipose Nuclei Adipose
20 chr1:184516400-184524600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr1:184516400-184529000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr1:184517000-184524200 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr1:184517200-184522800 Weak transcription NHEK skin
24 chr1:184517200-184524400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:184517200-184524400 Weak transcription Left Ventricle heart
26 chr1:184517400-184524200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:184517400-184524400 Weak transcription Right Ventricle heart
28 chr1:184520800-184542000 Weak transcription Ovary ovary
29 chr1:184521000-184523600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:184521000-184524200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr1:184521000-184525400 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr1:184521000-184530200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:184521000-184535800 Weak transcription Primary hematopoietic stem cells blood
34 chr1:184521000-184547400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr1:184521200-184524400 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr1:184521600-184524000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:184521800-184524800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:184522600-184522800 Enhancers Brain Germinal Matrix brain
39 chr1:184522600-184523000 Enhancers Esophagus oesophagus
40 chr1:184522600-184523000 Enhancers Psoas Muscle Psoas
41 chr1:184522600-184523000 Enhancers Sigmoid Colon Sigmoid Colon
42 chr1:184522600-184523200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015