The 2.0 version of rSNPBase

Variant report

Variant rs4651222
Chromosome Location chr1:184546563-184546564
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184521000-184547400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:184533200-184547400 Weak transcription Colon Smooth Muscle Colon
3 chr1:184536000-184559000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr1:184536000-184559000 Weak transcription NHEK skin
5 chr1:184536200-184549200 Weak transcription NHDF-Ad bronchial
6 chr1:184536800-184559200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:184537200-184559000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:184538000-184559400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:184538400-184558000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:184538400-184558000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:184538400-184559000 Weak transcription Right Atrium heart
12 chr1:184538600-184549000 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr1:184538800-184548600 Weak transcription Fetal Intestine Small intestine
14 chr1:184544000-184546600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:184544200-184546600 Enhancers Brain Anterior Caudate brain
16 chr1:184544200-184551200 Weak transcription Small Intestine intestine
17 chr1:184544400-184552800 Weak transcription H1 Cell Line embryonic stem cell
18 chr1:184544600-184547400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr1:184544600-184552400 Weak transcription Fetal Lung lung
20 chr1:184545000-184546800 Enhancers Skeletal Muscle Male skeletal muscle
21 chr1:184545000-184546800 Enhancers Skeletal Muscle Female skeletal muscle
22 chr1:184545600-184546800 Enhancers Psoas Muscle Psoas
23 chr1:184545600-184547400 Enhancers Fetal Muscle Leg muscle
24 chr1:184545600-184547600 Enhancers Adipose Nuclei Adipose
25 chr1:184545800-184546600 Enhancers Cortex derived primary cultured neurospheres brain
26 chr1:184545800-184546600 Enhancers Brain Cingulate Gyrus brain
27 chr1:184545800-184546600 Enhancers Fetal Stomach stomach
28 chr1:184545800-184546600 Enhancers Rectal Smooth Muscle rectum
29 chr1:184545800-184547000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:184546000-184546600 Enhancers Brain Angular Gyrus brain
31 chr1:184546200-184546600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:184546200-184546600 Enhancers Fetal Brain Male brain
33 chr1:184546200-184547200 Weak transcription Fetal Muscle Trunk muscle
34 chr1:184546200-184551600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr1:184546200-184563800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr1:184546200-184566600 Weak transcription Left Ventricle heart
37 chr1:184546400-184546600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:184546400-184546600 Enhancers Brain Hippocampus Middle brain

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Last update: Aug 31, 2015