The 2.0 version of rSNPBase

Variant report

Variant rs1856561
Chromosome Location chr1:184562138-184562139
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184546200-184563800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr1:184546200-184566600 Weak transcription Left Ventricle heart
3 chr1:184547800-184580000 Weak transcription Colon Smooth Muscle Colon
4 chr1:184549400-184564600 Weak transcription NHDF-Ad bronchial
5 chr1:184553200-184566200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr1:184553200-184566600 Weak transcription Fetal Stomach stomach
7 chr1:184553600-184566200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr1:184553600-184566200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr1:184557000-184566400 Weak transcription Psoas Muscle Psoas
10 chr1:184557000-184566400 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr1:184557200-184566400 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr1:184557200-184574000 Weak transcription Fetal Muscle Trunk muscle
13 chr1:184557200-184591600 Weak transcription Aorta Aorta
14 chr1:184558600-184564600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:184558600-184564800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:184558600-184566400 Weak transcription Fetal Muscle Leg muscle
17 chr1:184558600-184568000 Weak transcription Pancreas Pancrea
18 chr1:184558600-184572600 Weak transcription Lung lung
19 chr1:184558800-184566600 Weak transcription Fetal Lung lung
20 chr1:184559000-184588400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr1:184559200-184564400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:184559200-184564800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:184559200-184566600 Weak transcription Right Ventricle heart
24 chr1:184559200-184580400 Weak transcription Adipose Nuclei Adipose
25 chr1:184559400-184580400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:184559600-184563600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:184559600-184564600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:184559600-184564800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:184559600-184565000 Weak transcription Placenta Amnion Placenta Amnion
30 chr1:184559600-184578000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr1:184559800-184563400 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr1:184559800-184564200 Weak transcription NHEK skin
33 chr1:184559800-184564800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:184559800-184566200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:184559800-184566400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr1:184560000-184564800 Weak transcription HMEC breast
37 chr1:184560200-184566600 Weak transcription Liver Liver
38 chr1:184560400-184562400 Weak transcription Stomach Mucosa stomach
39 chr1:184560400-184564600 Weak transcription HSMM muscle
40 chr1:184560400-184565600 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr1:184560400-184566400 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr1:184560400-184566400 Weak transcription Small Intestine intestine
43 chr1:184560600-184571400 Weak transcription Fetal Intestine Large intestine
44 chr1:184560600-184591000 Weak transcription Fetal Intestine Small intestine
45 chr1:184560800-184563000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr1:184561000-184563400 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr1:184561600-184563400 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr1:184561800-184562400 Enhancers A549 lung
49 chr1:184561800-184562600 Strong transcription Duodenum Mucosa Duodenum
50 chr1:184561800-184564600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015