The 2.0 version of rSNPBase

Variant report

Variant rs34959231
Chromosome Location chr1:184595076-184595077
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184573600-184598800 Weak transcription H1 Cell Line embryonic stem cell
2 chr1:184578600-184598800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:184580800-184605000 Weak transcription Fetal Brain Female brain
4 chr1:184581000-184598800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:184581000-184602200 Weak transcription Brain Germinal Matrix brain
6 chr1:184585000-184599600 Weak transcription Primary hematopoietic stem cells blood
7 chr1:184585200-184597600 Weak transcription Fetal Brain Male brain
8 chr1:184585200-184611600 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr1:184589200-184597200 Enhancers Skeletal Muscle Female skeletal muscle
10 chr1:184589800-184596200 Enhancers Psoas Muscle Psoas
11 chr1:184589800-184598800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:184590600-184597200 Enhancers Left Ventricle heart
13 chr1:184590800-184596600 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr1:184590800-184602200 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr1:184590800-184602800 Weak transcription Brain Cingulate Gyrus brain
16 chr1:184591000-184596600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:184591400-184596400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:184591600-184595800 Enhancers Placenta Placenta
19 chr1:184592000-184595600 Enhancers Skeletal Muscle Male skeletal muscle
20 chr1:184592000-184596000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr1:184592000-184596200 Weak transcription Brain Inferior Temporal Lobe brain
22 chr1:184592000-184596400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:184592000-184598800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr1:184592000-184602400 Weak transcription Gastric stomach
25 chr1:184592200-184595200 Weak transcription Colonic Mucosa Colon
26 chr1:184592200-184598400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:184592200-184599600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:184592200-184602400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:184592200-184602800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:184592200-184604800 Weak transcription Brain Angular Gyrus brain
31 chr1:184592200-184615800 Weak transcription Aorta Aorta
32 chr1:184592400-184595400 Weak transcription Small Intestine intestine
33 chr1:184592400-184595400 Weak transcription Stomach Smooth Muscle stomach
34 chr1:184592400-184595600 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr1:184592400-184598800 Weak transcription NHLF lung
36 chr1:184592800-184597400 Strong transcription Fetal Intestine Small intestine
37 chr1:184592800-184598800 Weak transcription Fetal Heart heart
38 chr1:184593400-184595600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr1:184593400-184596400 Enhancers Right Atrium heart
40 chr1:184593400-184597800 Enhancers Fetal Muscle Leg muscle
41 chr1:184593600-184597800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:184593800-184596400 Enhancers NHEK skin
43 chr1:184593800-184602600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:184594000-184598800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:184594200-184595400 Weak transcription Colon Smooth Muscle Colon
46 chr1:184594200-184595400 Weak transcription Ovary ovary
47 chr1:184594200-184595600 Enhancers Fetal Lung lung
48 chr1:184594200-184595800 Weak transcription Muscle Satellite Cultured Cells --
49 chr1:184594200-184598400 Weak transcription Primary monocytes fromperipheralblood blood
50 chr1:184594200-184598400 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015