The 2.0 version of rSNPBase

Variant report

Variant rs9425342
Chromosome Location chr1:184662063-184662064
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:184641400-184672800 Weak transcription Gastric stomach
2 chr1:184649400-184662800 Weak transcription Osteobl bone
3 chr1:184653200-184705000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:184654000-184662200 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr1:184654000-184662200 Weak transcription Fetal Muscle Trunk muscle
6 chr1:184654000-184662200 Weak transcription Left Ventricle heart
7 chr1:184654000-184662800 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr1:184654000-184710800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:184654200-184662200 Weak transcription Brain Angular Gyrus brain
10 chr1:184654200-184662200 Weak transcription Psoas Muscle Psoas
11 chr1:184654200-184662200 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr1:184654200-184662200 Weak transcription NHDF-Ad bronchial
13 chr1:184654200-184662400 Weak transcription Colon Smooth Muscle Colon
14 chr1:184654200-184662600 Weak transcription Ovary ovary
15 chr1:184654200-184672000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:184654200-184701200 Weak transcription Stomach Mucosa stomach
17 chr1:184654200-184710000 Weak transcription Esophagus oesophagus
18 chr1:184654400-184662200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:184654400-184662200 Weak transcription Adipose Nuclei Adipose
20 chr1:184654400-184662200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:184654400-184662400 Weak transcription Brain Hippocampus Middle brain
22 chr1:184654400-184675400 Weak transcription Pancreas Pancrea
23 chr1:184654600-184662200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:184654600-184665800 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr1:184654600-184672400 Weak transcription Brain Inferior Temporal Lobe brain
26 chr1:184654800-184662400 Weak transcription Placenta Placenta
27 chr1:184654800-184669600 Weak transcription Fetal Lung lung
28 chr1:184655000-184662200 Weak transcription GM12878-XiMat blood
29 chr1:184655000-184664400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr1:184655800-184663200 Weak transcription Brain Germinal Matrix brain
31 chr1:184656000-184672000 Weak transcription HepG2 liver
32 chr1:184656200-184662200 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr1:184656400-184672800 Weak transcription Spleen Spleen
34 chr1:184656600-184662200 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr1:184656600-184662200 Weak transcription HSMMtube muscle
36 chr1:184656600-184670200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr1:184656600-184684000 Weak transcription Fetal Heart heart
38 chr1:184656800-184662200 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr1:184657000-184672600 Weak transcription Lung lung
40 chr1:184657200-184662400 Weak transcription Muscle Satellite Cultured Cells --
41 chr1:184657200-184672800 Weak transcription Fetal Intestine Small intestine
42 chr1:184657400-184672800 Weak transcription Fetal Stomach stomach
43 chr1:184657800-184670200 Weak transcription HMEC breast
44 chr1:184658000-184662200 Weak transcription Primary T cells from cord blood blood
45 chr1:184658000-184662200 Weak transcription Brain Substantia Nigra brain
46 chr1:184658000-184662400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:184658000-184662400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr1:184658400-184706800 Strong transcription Primary neutrophils fromperipheralblood blood
49 chr1:184658600-184662800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr1:184658600-184665400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015