Variant report
| Variant | rs34579903 |
|---|---|
| Chromosome Location | chr1:184444444-184444445 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:184427400-184448400 | Weak transcription | Fetal Muscle Leg | muscle |
| 2 | chr1:184429000-184454800 | Weak transcription | Aorta | Aorta |
| 3 | chr1:184429400-184449600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr1:184430600-184449800 | Weak transcription | Right Ventricle | heart |
| 5 | chr1:184430600-184450000 | Weak transcription | Fetal Stomach | stomach |
| 6 | chr1:184431400-184446400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 7 | chr1:184431800-184447600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 8 | chr1:184433600-184449600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 9 | chr1:184438000-184450600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 10 | chr1:184439200-184453600 | Weak transcription | Fetal Brain Female | brain |
| 11 | chr1:184440600-184445800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 12 | chr1:184440800-184446200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 13 | chr1:184441000-184445000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 14 | chr1:184441000-184452000 | Weak transcription | Colonic Mucosa | Colon |
| 15 | chr1:184441800-184447400 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 16 | chr1:184442000-184448400 | ZNF genes & repeats | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 17 | chr1:184442200-184444600 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 18 | chr1:184442200-184444600 | ZNF genes & repeats | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 19 | chr1:184442400-184446000 | Weak transcription | Fetal Intestine Large | intestine |
| 20 | chr1:184442600-184446600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 21 | chr1:184442600-184447400 | Weak transcription | Left Ventricle | heart |
| 22 | chr1:184442800-184446400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 23 | chr1:184442800-184446400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 24 | chr1:184442800-184447800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 25 | chr1:184442800-184449200 | Weak transcription | Placenta | Placenta |
| 26 | chr1:184442800-184449600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 27 | chr1:184443600-184444600 | ZNF genes & repeats | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 28 | chr1:184443600-184444600 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 29 | chr1:184443600-184445200 | ZNF genes & repeats | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 30 | chr1:184443800-184444600 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
| 31 | chr1:184443800-184444600 | Genic enhancers | Skeletal Muscle Male | skeletal muscle |
| 32 | chr1:184443800-184446200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 33 | chr1:184444000-184444600 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 34 | chr1:184444000-184444600 | ZNF genes & repeats | Adipose Nuclei | Adipose |
| 35 | chr1:184444000-184444600 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 36 | chr1:184444000-184445600 | Enhancers | Psoas Muscle | Psoas |
| 37 | chr1:184444000-184446800 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
| 38 | chr1:184444200-184446000 | Weak transcription | Lung | lung |
| 39 | chr1:184444200-184446200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 40 | chr1:184444200-184446200 | Weak transcription | Esophagus | oesophagus |
| 41 | chr1:184444200-184449000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 42 | chr1:184444200-184449800 | Weak transcription | Ovary | ovary |
| 43 | chr1:184444200-184449800 | Weak transcription | Right Atrium | heart |
| 44 | chr1:184444200-184450400 | Weak transcription | Pancreas | Pancrea |
| 45 | chr1:184444200-184453400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 46 | chr1:184444400-184444600 | ZNF genes & repeats | Primary Natural Killer cells fromperipheralblood | blood |
| 47 | chr1:184444400-184445000 | Enhancers | Fetal Brain Male | brain |
| 48 | chr1:184444400-184446400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 49 | chr1:184444400-184446400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 50 | chr1:184444400-184447800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
