Variant report

Variant	rs73048443
Chromosome Location	chr3:25187193-25187194
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs13061437	0.81[AFR][1000 genomes]
rs13068891	0.81[AFR][1000 genomes]
rs13076408	0.88[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs17517792	0.81[AFR][1000 genomes]
rs34112261	0.81[AFR][1000 genomes]
rs34283888	0.81[AFR][1000 genomes]
rs34370374	0.81[AFR][1000 genomes]
rs35045659	0.81[AFR][1000 genomes]
rs35069077	0.81[AFR][1000 genomes]
rs35183943	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35396731	0.88[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs35806066	0.88[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs36023080	0.88[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs36109861	0.93[EUR][1000 genomes]
rs57828525	0.88[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs6771604	0.88[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs67987013	0.88[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs6804869	0.88[EUR][1000 genomes]
rs71311525	0.88[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs71311526	0.81[AFR][1000 genomes]
rs71622827	0.81[AFR][1000 genomes]
rs73049948	0.90[EUR][1000 genomes]
rs9812604	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013446	chr3:25176609-25221334	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv876631	chr3:25185448-25231571	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:25184600-25187400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr3:25185600-25192200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr3:25186600-25191800	Weak transcription	Fetal Stomach	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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