Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10735869	0.96[ASN][1000 genomes]
rs10876941	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10876943	0.88[EUR][1000 genomes]
rs11172025	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11172033	0.88[EUR][1000 genomes]
rs4254104	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4472974	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4477473	0.88[EUR][1000 genomes]
rs4759036	0.88[EUR][1000 genomes]
rs55812315	0.81[EUR][1000 genomes]
rs7303219	1.00[ASN][1000 genomes]
rs7306442	1.00[ASN][1000 genomes]
rs7314652	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7955918	0.85[EUR][1000 genomes]
rs7956391	0.81[EUR][1000 genomes]
rs7959654	0.88[EUR][1000 genomes]
rs7959725	0.83[EUR][1000 genomes]
rs7960137	0.88[EUR][1000 genomes]
rs7961602	0.87[EUR][1000 genomes]
rs7967940	0.88[EUR][1000 genomes]
rs7972591	0.88[EUR][1000 genomes]
rs7979655	0.88[EUR][1000 genomes]
rs9668259	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040850	chr12:57055011-57679209	Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:57255800-57259200	ZNF genes & repeats	Liver	Liver

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