Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:57257052..57259675-chr12:57321965..57323642,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10735869	0.96[ASN][1000 genomes]
rs10876941	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10876943	0.87[EUR][1000 genomes]
rs11172025	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11172033	0.87[EUR][1000 genomes]
rs4254104	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4472974	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4477473	0.87[EUR][1000 genomes]
rs4759036	0.87[EUR][1000 genomes]
rs55812315	0.81[EUR][1000 genomes]
rs7303219	1.00[ASN][1000 genomes]
rs7305700	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7306442	1.00[ASN][1000 genomes]
rs7955918	0.84[EUR][1000 genomes]
rs7956391	0.81[EUR][1000 genomes]
rs7959654	0.87[EUR][1000 genomes]
rs7959725	0.82[EUR][1000 genomes]
rs7960137	0.87[EUR][1000 genomes]
rs7961602	0.86[EUR][1000 genomes]
rs7967940	0.87[EUR][1000 genomes]
rs7972591	0.87[EUR][1000 genomes]
rs7979655	0.87[EUR][1000 genomes]
rs9668259	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040850	chr12:57055011-57679209	Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:57255800-57259200	ZNF genes & repeats	Liver	Liver
2	chr12:57256800-57262200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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