Variant report

Variant	rs73061893
Chromosome Location	chr1:210762745-210762746
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10746431	0.87[EUR][1000 genomes]
rs60650082	1.00[EUR][1000 genomes]
rs6696688	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73061892	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873148	chr1:210665583-210994339	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
2	nsv873149	chr1:210749312-210793972	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Strong transcription	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:210756200-210771800	Weak transcription	Left Ventricle	heart
2	chr1:210758600-210763000	Weak transcription	A549	lung
3	chr1:210760400-210763200	Weak transcription	Brain Anterior Caudate	brain
4	chr1:210760400-210763200	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr1:210760600-210763200	Weak transcription	Brain Angular Gyrus	brain
6	chr1:210760800-210763000	Weak transcription	Brain Cingulate Gyrus	brain
7	chr1:210761000-210763200	Weak transcription	Brain Hippocampus Middle	brain
8	chr1:210761000-210763200	Weak transcription	Brain Substantia Nigra	brain
9	chr1:210761400-210762800	Weak transcription	NH-A	brain
10	chr1:210761400-210771600	Weak transcription	Gastric	stomach
11	chr1:210761600-210762800	Weak transcription	Ovary	ovary
12	chr1:210761600-210763000	Weak transcription	HSMMtube	muscle
13	chr1:210761600-210770400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr1:210762000-210763200	Enhancers	Osteobl	bone
15	chr1:210762400-210763200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr1:210762400-210770400	Weak transcription	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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