Variant report

Variant	rs73073971
Chromosome Location	chr3:56407309-56407310
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs17056721	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2034625	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs55703247	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs55839257	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56177242	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6780890	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73073903	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73073991	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73073994	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73088533	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73088551	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73090532	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73090573	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73835005	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56390800-56410000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr3:56405200-56408800	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr3:56405400-56407800	Enhancers	H1 Cell Line	embryonic stem cell
4	chr3:56406000-56407400	Weak transcription	Adipose Nuclei	Adipose
5	chr3:56406000-56407400	Weak transcription	Brain Substantia Nigra	brain
6	chr3:56406000-56407600	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr3:56406400-56409800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr3:56406800-56408000	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr3:56406800-56408200	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr3:56407000-56408200	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr3:56407200-56407400	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr3:56407200-56407800	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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