Variant report

Variant	rs73084917
Chromosome Location	chr5:35275504-35275505
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:35274376..35277047-chr5:35315929..35318564,3	MCF-7	breast:
2	chr5:35227292..35232532-chr5:35268610..35275737,14	MCF-7	breast:
3	chr5:35275062..35277418-chr5:35280466..35282172,2	MCF-7	breast:
4	chr5:35273782..35276112-chr5:35309068..35310814,2	MCF-7	breast:
5	chr5:35267991..35269691-chr5:35272577..35276280,3	MCF-7	breast:
6	chr5:35275072..35277917-chr5:35279570..35281250,2	MCF-7	breast:
7	chr5:35273850..35275534-chr5:35293327..35295297,2	MCF-7	breast:
8	chr5:35273068..35277426-chr5:35305391..35308991,5	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs10472964	1.00[AMR][1000 genomes]
rs59276755	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73084932	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv597811	chr5:35270560-35305669	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
2	nsv4791	chr5:35271967-35297546	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35275200-35275600	Enhancers	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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