Variant report

Variant	rs73086186
Chromosome Location	chr20:10745376-10745377
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs55999852	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv522874	chr20:9899439-10819210	Weak transcription Flanking Active TSS Active TSS Genic enhancers Enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	57 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:10742800-10764600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr20:10743000-10746400	Weak transcription	NHLF	lung
3	chr20:10743000-10749800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr20:10743200-10750200	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr20:10743200-10750200	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr20:10744200-10746200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr20:10744200-10749200	Weak transcription	HUVEC	blood vessel
8	chr20:10744200-10750000	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr20:10744800-10752000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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