Variant report

Variant	rs73099738
Chromosome Location	chr1:213609629-213609630
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs17020746	1.00[EUR][1000 genomes]
rs17020760	1.00[EUR][1000 genomes]
rs61028681	1.00[EUR][1000 genomes]
rs73082846	0.85[AFR][1000 genomes]
rs73082850	0.85[AFR][1000 genomes]
rs73082856	0.85[AFR][1000 genomes]
rs73082880	1.00[EUR][1000 genomes]
rs73082886	1.00[EUR][1000 genomes]
rs73099735	0.85[AFR][1000 genomes]
rs9803934	1.00[EUR][1000 genomes]
rs9804082	1.00[EUR][1000 genomes]
rs9804109	1.00[EUR][1000 genomes]
rs9804130	1.00[EUR][1000 genomes]
rs9804134	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832525	chr1:213580476-213782815	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv947379	chr1:213604299-213621817	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:213609200-213609800	Enhancers	HUES64 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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