Variant report

Variant	rs73113112
Chromosome Location	chr5:60993963-60993964
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C5orf43-4	chr5:60993739-60994259	ENSG00000248529.1
2	lnc-C5orf43-4	chr5:60993739-60994259	NR_109910
3	lnc-C5orf43-4	chr5:60993721-60994229	NONHSAT101685

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs56681711	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56865059	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56954135	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57342486	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57375803	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57473076	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58097145	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58257907	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58737411	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58772380	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59712672	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59820088	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60874134	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61149973	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61386464	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61613833	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6449547	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6873043	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6889701	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6894892	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73102112	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73102138	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113123	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113130	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113137	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113141	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113149	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113150	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113151	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113153	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113156	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113176	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:60993400-60994200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr5:60993600-60994400	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr5:60993800-60994400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr5:60993800-60994400	Enhancers	Spleen	Spleen
5	chr5:60993800-60994800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr5:60993800-60994800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr5:60993800-60995400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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