Variant report

Variant	rs73113141
Chromosome Location	chr5:61001103-61001104
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs56681711	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56865059	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56954135	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57342486	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57375803	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57473076	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58097145	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58257907	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58737411	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58772380	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59712672	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59820088	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60874134	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61149973	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61386464	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61613833	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6449547	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6873043	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6889701	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6894892	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73102112	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73102138	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113112	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113123	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113130	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113137	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113149	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113150	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113151	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113153	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113156	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73113176	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:60994400-61002400	Weak transcription	Fetal Muscle Leg	muscle
2	chr5:60994800-61002600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr5:60997800-61001800	Weak transcription	Brain Cingulate Gyrus	brain
4	chr5:60997800-61015200	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr5:60998000-61003600	Weak transcription	Brain Hippocampus Middle	brain
6	chr5:60998200-61002600	Weak transcription	Brain Anterior Caudate	brain
7	chr5:60998400-61002600	Weak transcription	Brain Substantia Nigra	brain
8	chr5:60998800-61002600	Weak transcription	Adipose Nuclei	Adipose
9	chr5:60999000-61001400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr5:60999400-61001400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr5:60999800-61001600	Enhancers	HMEC	breast
12	chr5:60999800-61001600	Enhancers	NHEK	skin
13	chr5:61000200-61002000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr5:61000400-61002800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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