Variant report

Variant	rs73124980
Chromosome Location	chr5:68264241-68264242
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs4458534	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73112960	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73112962	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73112966	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73112978	1.00[AMR][1000 genomes]
rs73112982	1.00[AMR][1000 genomes]
rs73124953	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73124990	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73124993	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830332	chr5:68238288-68282681	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68263800-68264800	Enhancers	HepG2	liver
2	chr5:68263800-68271400	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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