The 2.0 version of rSNPBase

Variant report

Variant rs73125416
Chromosome Location chr5:80075966-80075967
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79971800-80112400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr5:79985000-80100600 Weak transcription Brain Germinal Matrix brain
3 chr5:79998800-80109400 Weak transcription Brain Inferior Temporal Lobe brain
4 chr5:80041200-80076000 Weak transcription Small Intestine intestine
5 chr5:80041200-80100400 Weak transcription Gastric stomach
6 chr5:80041800-80094200 Weak transcription NHLF lung
7 chr5:80042800-80089200 Weak transcription Brain Substantia Nigra brain
8 chr5:80042800-80118200 Weak transcription Spleen Spleen
9 chr5:80042800-80173400 Weak transcription Right Ventricle heart
10 chr5:80043400-80076200 Weak transcription HUVEC blood vessel
11 chr5:80043600-80089000 Weak transcription Stomach Smooth Muscle stomach
12 chr5:80044000-80096400 Weak transcription Brain Anterior Caudate brain
13 chr5:80048800-80088000 Weak transcription Fetal Kidney kidney
14 chr5:80049400-80089000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr5:80049600-80077000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr5:80049800-80088800 Weak transcription Colon Smooth Muscle Colon
17 chr5:80051000-80078600 Weak transcription NHDF-Ad bronchial
18 chr5:80051200-80077000 Weak transcription NH-A brain
19 chr5:80051200-80084000 Weak transcription Thymus Thymus
20 chr5:80051600-80088600 Weak transcription Rectal Smooth Muscle rectum
21 chr5:80051600-80088800 Weak transcription Colonic Mucosa Colon
22 chr5:80051600-80095000 Weak transcription Psoas Muscle Psoas
23 chr5:80051800-80089000 Weak transcription HSMMtube muscle
24 chr5:80052200-80095600 Weak transcription Fetal Brain Male brain
25 chr5:80052400-80085400 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr5:80053000-80088600 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr5:80056800-80089000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr5:80057000-80085600 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr5:80057200-80083800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr5:80057200-80088000 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr5:80057200-80090000 Weak transcription Aorta Aorta
32 chr5:80057200-80094200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr5:80057400-80089200 Weak transcription K562 blood
34 chr5:80058000-80076800 Weak transcription NHEK skin
35 chr5:80058000-80089000 Weak transcription Brain Hippocampus Middle brain
36 chr5:80059400-80088600 Weak transcription Fetal Brain Female brain
37 chr5:80059600-80076000 Weak transcription Fetal Muscle Leg muscle
38 chr5:80059600-80089200 Weak transcription Lung lung
39 chr5:80059800-80085400 Weak transcription Primary hematopoietic stem cells blood
40 chr5:80061000-80076200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr5:80064400-80088600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr5:80064600-80088800 Weak transcription HSMM muscle
43 chr5:80064800-80089200 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr5:80065400-80076800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr5:80068800-80077200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr5:80069000-80093600 Weak transcription Pancreas Pancrea
47 chr5:80069400-80089200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr5:80069600-80077000 Weak transcription HMEC breast
49 chr5:80070200-80086000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr5:80071800-80077400 Strong transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015