The 2.0 version of rSNPBase

Variant report

Variant rs73128409
Chromosome Location chr1:224407857-224407858
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224389600-224414400 Weak transcription Fetal Brain Female brain
2 chr1:224393800-224414200 Weak transcription Colonic Mucosa Colon
3 chr1:224394000-224414000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr1:224394000-224414600 Weak transcription HMEC breast
5 chr1:224398000-224414200 Weak transcription Spleen Spleen
6 chr1:224399400-224411000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:224399400-224414200 Weak transcription Adipose Nuclei Adipose
8 chr1:224399400-224414200 Weak transcription Brain Anterior Caudate brain
9 chr1:224401400-224413800 Weak transcription Primary B cells from cord blood blood
10 chr1:224401400-224413800 Weak transcription Fetal Muscle Trunk muscle
11 chr1:224401400-224414800 Weak transcription Right Ventricle heart
12 chr1:224401600-224414400 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:224401800-224411000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:224401800-224411000 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr1:224401800-224411000 Weak transcription Small Intestine intestine
16 chr1:224401800-224415200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr1:224401800-224427600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr1:224401800-224475400 Weak transcription Esophagus oesophagus
19 chr1:224402200-224411000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:224402200-224413800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr1:224402200-224414200 Weak transcription GM12878-XiMat blood
22 chr1:224403800-224411000 Weak transcription Left Ventricle heart
23 chr1:224404000-224411600 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr1:224404400-224411200 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr1:224405600-224408000 Enhancers Fetal Intestine Large intestine
26 chr1:224405800-224408000 Enhancers Fetal Intestine Small intestine
27 chr1:224406000-224414200 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr1:224406200-224413800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:224406200-224414200 Weak transcription Primary B cells from peripheral blood blood
30 chr1:224406200-224414200 Weak transcription Primary hematopoietic stem cells blood
31 chr1:224406200-224414200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr1:224406200-224414200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:224406200-224414200 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr1:224406200-224414200 Weak transcription Fetal Muscle Leg muscle
35 chr1:224406200-224414400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr1:224406400-224408000 Enhancers Duodenum Mucosa Duodenum
37 chr1:224406400-224414200 Weak transcription Primary monocytes fromperipheralblood blood
38 chr1:224406600-224408000 Enhancers NHEK skin
39 chr1:224406800-224411000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:224406800-224411000 Weak transcription Fetal Stomach stomach
41 chr1:224406800-224414400 Weak transcription Pancreas Pancrea
42 chr1:224407000-224411400 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr1:224407200-224408000 Enhancers Gastric stomach
44 chr1:224407200-224411000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:224407200-224411600 Weak transcription K562 blood
46 chr1:224407200-224413800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:224407200-224414400 Weak transcription Placenta Placenta
48 chr1:224407400-224411000 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr1:224407400-224411200 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr1:224407400-224411400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015