The 2.0 version of rSNPBase

Variant report

Variant rs73135413
Chromosome Location chr3:100238777-100238778
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100227200-100239400 Weak transcription Ovary ovary
2 chr3:100227400-100239400 Weak transcription Aorta Aorta
3 chr3:100227400-100239400 Weak transcription Fetal Stomach stomach
4 chr3:100235200-100242000 Enhancers Primary neutrophils fromperipheralblood blood
5 chr3:100235800-100244800 Weak transcription Muscle Satellite Cultured Cells --
6 chr3:100236400-100242600 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr3:100236800-100238800 Enhancers Placenta Amnion Placenta Amnion
8 chr3:100237000-100240600 Weak transcription GM12878-XiMat blood
9 chr3:100237200-100239000 Weak transcription Fetal Muscle Leg muscle
10 chr3:100237200-100240600 Enhancers Monocytes-CD14+_RO01746 blood
11 chr3:100237400-100238800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr3:100237400-100239000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr3:100237600-100238800 Enhancers HMEC breast
14 chr3:100237600-100239200 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr3:100237600-100239400 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr3:100237600-100241600 Weak transcription HepG2 liver
17 chr3:100237600-100244200 Weak transcription NH-A brain
18 chr3:100237800-100239400 Weak transcription Stomach Smooth Muscle stomach
19 chr3:100238000-100244400 Weak transcription Adipose Nuclei Adipose
20 chr3:100238000-100244400 Weak transcription Rectal Smooth Muscle rectum
21 chr3:100238000-100252600 Weak transcription Fetal Intestine Small intestine
22 chr3:100238000-100265400 Weak transcription HSMMtube muscle
23 chr3:100238200-100238800 Strong transcription Fetal Lung lung
24 chr3:100238200-100238800 Enhancers K562 blood
25 chr3:100238200-100239000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr3:100238200-100239400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr3:100238200-100239400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr3:100238200-100240400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr3:100238200-100240600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr3:100238200-100244400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr3:100238200-100244400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr3:100238200-100244400 Weak transcription HSMM muscle
33 chr3:100238400-100239600 Weak transcription Liver Liver
34 chr3:100238400-100240400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr3:100238400-100244200 Weak transcription NHDF-Ad bronchial
36 chr3:100238600-100238800 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr3:100238600-100239000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr3:100238600-100239600 Weak transcription Primary monocytes fromperipheralblood blood
39 chr3:100238600-100239800 Weak transcription NHEK skin

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Last update: Aug 31, 2015