Variant report

Variant	rs7313624
Chromosome Location	chr12:32785284-32785285
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1004968	0.82[EUR][1000 genomes]
rs10771970	0.90[EUR][1000 genomes]
rs10771971	0.93[EUR][1000 genomes]
rs10844255	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10844256	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10844257	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10844258	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10844262	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10844264	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10844265	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11052123	0.97[EUR][1000 genomes]
rs11052124	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1133509	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1239829	0.93[EUR][1000 genomes]
rs1875060	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1880557	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1909510	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4438130	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4931648	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6488072	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs67940080	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7306370	0.92[EUR][1000 genomes]
rs7962152	0.82[YRI][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7966020	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]

No data

Chromatin state (count:100 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:32713400-32796200	Weak transcription	Fetal Lung	lung
2	chr12:32744200-32797600	Weak transcription	Fetal Heart	heart
3	chr12:32754200-32795200	Weak transcription	Primary B cells from cord blood	blood
4	chr12:32755400-32800600	Strong transcription	Monocytes-CD14+_RO01746	blood
5	chr12:32756200-32789800	Strong transcription	Primary monocytes fromperipheralblood	blood
6	chr12:32757400-32799600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr12:32757600-32798000	Strong transcription	HUES48 Cell Line	embryonic stem cell
8	chr12:32757800-32797800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr12:32758400-32799400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
10	chr12:32758600-32797800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr12:32758600-32799600	Strong transcription	Liver	Liver
12	chr12:32758600-32800400	Strong transcription	HSMM	muscle
13	chr12:32758800-32799600	Strong transcription	HUES64 Cell Line	embryonic stem cell
14	chr12:32759800-32795000	Weak transcription	Fetal Kidney	kidney
15	chr12:32760200-32795000	Weak transcription	Pancreatic Islets	Pancreatic Islet
16	chr12:32760600-32793200	Weak transcription	Primary hematopoietic stem cells	blood
17	chr12:32762800-32799600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr12:32765200-32794000	Weak transcription	NHLF	lung
19	chr12:32765400-32789000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr12:32765400-32790400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr12:32765800-32797000	Strong transcription	Adipose Nuclei	Adipose
22	chr12:32767400-32790600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr12:32767400-32797000	Weak transcription	Psoas Muscle	Psoas
24	chr12:32768400-32799800	Weak transcription	NHDF-Ad	bronchial
25	chr12:32769600-32788200	Strong transcription	Rectal Mucosa Donor 29	rectum
26	chr12:32771400-32796200	Strong transcription	Fetal Intestine Large	intestine
27	chr12:32772600-32796000	Strong transcription	HUES6 Cell Line	embryonic stem cell
28	chr12:32772600-32800000	Strong transcription	Muscle Satellite Cultured Cells	--
29	chr12:32773000-32787200	Strong transcription	Fetal Intestine Small	intestine
30	chr12:32774800-32793000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr12:32776400-32796000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr12:32776600-32798400	Strong transcription	Cortex derived primary cultured neurospheres	brain
33	chr12:32777000-32800200	Strong transcription	Primary neutrophils fromperipheralblood	blood
34	chr12:32778800-32794800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
35	chr12:32778800-32800400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr12:32779000-32790800	Weak transcription	Fetal Brain Male	brain
37	chr12:32779000-32791200	Weak transcription	HMEC	breast
38	chr12:32779600-32789600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
39	chr12:32779600-32792800	Weak transcription	Stomach Mucosa	stomach
40	chr12:32779600-32800400	Weak transcription	Small Intestine	intestine
41	chr12:32779800-32790600	Weak transcription	Placenta	Placenta
42	chr12:32780800-32793000	Weak transcription	NH-A	brain
43	chr12:32781000-32789400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr12:32781000-32791000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr12:32781200-32785800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
46	chr12:32781200-32791200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
47	chr12:32781400-32785600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
48	chr12:32781600-32790600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
49	chr12:32781600-32791600	Weak transcription	Brain Inferior Temporal Lobe	brain
50	chr12:32781800-32785800	Weak transcription	Fetal Muscle Leg	muscle

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