Variant report

Variant	rs73142095
Chromosome Location	chr5:94624941-94624942
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17084568	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17084577	0.83[AMR][1000 genomes]
rs58576599	0.91[EUR][1000 genomes]
rs58831977	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59355328	0.83[AMR][1000 genomes]
rs73142082	1.00[EUR][1000 genomes]
rs73142086	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432752	chr5:94524244-94691044	Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94624600-94625000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr5:94624600-94625000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr5:94624600-94625200	Enhancers	Primary hematopoietic stem cells short term culture	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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