Variant report

Variant	rs73144129
Chromosome Location	chr7:67523775-67523776
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs2533475	0.87[ASN][1000 genomes]
rs2642156	0.98[ASN][1000 genomes]
rs4718700	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56182598	0.99[ASN][1000 genomes]
rs73700839	0.99[ASN][1000 genomes]
rs7809564	0.99[ASN][1000 genomes]
rs887420	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018102	chr7:67494709-67526914	Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:67522800-67523800	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr7:67522800-67523800	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr7:67522800-67523800	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr7:67522800-67523800	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr7:67522800-67523800	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr7:67523000-67523800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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