Variant report

Variant	rs7314903
Chromosome Location	chr12:62577636-62577637
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10219761	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10877807	0.90[JPT][hapmap]
rs10877808	0.90[JPT][hapmap]
rs10877809	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10877812	0.89[JPT][hapmap]
rs10877816	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs11174363	0.90[JPT][hapmap];0.82[YRI][hapmap]
rs11174365	0.90[JPT][hapmap]
rs11174376	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11174379	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs11174384	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs11174386	0.84[ASN][1000 genomes]
rs11174388	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs11174390	0.88[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs12227228	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs12312235	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12319281	0.90[JPT][hapmap]
rs12582117	0.90[JPT][hapmap]
rs1320937	0.89[JPT][hapmap]
rs1907971	0.90[JPT][hapmap]
rs35727424	0.81[ASN][1000 genomes]
rs4280050	0.84[ASN][1000 genomes]
rs67753559	0.84[ASN][1000 genomes]
rs7138634	0.84[ASN][1000 genomes]
rs7300029	0.85[ASN][1000 genomes]
rs7307385	0.90[JPT][hapmap]
rs7312872	0.90[JPT][hapmap]
rs7314968	0.88[CEU][hapmap];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832435	chr12:62407000-62601835	Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:62568800-62581800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr12:62577600-62578400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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