Variant report

Variant	rs73150147
Chromosome Location	chr5:94064901-94064902
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10056742	1.00[EUR][1000 genomes]
rs17083764	1.00[EUR][1000 genomes]
rs2044909	1.00[EUR][1000 genomes]
rs28404931	1.00[EUR][1000 genomes]
rs56077798	1.00[EUR][1000 genomes]
rs56276230	1.00[EUR][1000 genomes]
rs6875629	1.00[EUR][1000 genomes]
rs73132694	1.00[EUR][1000 genomes]
rs73132696	1.00[EUR][1000 genomes]
rs73133924	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73133925	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73133938	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73140279	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73145042	1.00[EUR][1000 genomes]
rs73145044	1.00[EUR][1000 genomes]
rs73145045	1.00[EUR][1000 genomes]
rs73150165	1.00[EUR][1000 genomes]
rs7708233	1.00[EUR][1000 genomes]
rs7711380	1.00[EUR][1000 genomes]
rs7725462	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882387	chr5:94001476-94071404	Strong transcription Transcr. at gene 5' and 3' Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94048600-94071600	Weak transcription	Lung	lung
2	chr5:94048600-94081400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr5:94049400-94081400	Weak transcription	HUVEC	blood vessel
4	chr5:94049800-94077600	Weak transcription	Primary hematopoietic stem cells	blood
5	chr5:94050600-94065400	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr5:94050600-94069000	Weak transcription	Hela-S3	cervix
7	chr5:94051000-94067800	Weak transcription	Fetal Thymus	thymus
8	chr5:94052400-94079600	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr5:94064600-94065200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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