Variant report

Variant	rs73154653
Chromosome Location	chr22:31191872-31191873
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs136231	0.85[EUR][1000 genomes]
rs136314	0.86[EUR][1000 genomes]
rs136322	0.84[EUR][1000 genomes]
rs136326	0.86[EUR][1000 genomes]
rs136327	0.82[EUR][1000 genomes]
rs136331	0.82[EUR][1000 genomes]
rs136335	0.82[EUR][1000 genomes]
rs136336	0.82[EUR][1000 genomes]
rs136347	0.82[EUR][1000 genomes]
rs136349	0.82[EUR][1000 genomes]
rs136350	0.82[EUR][1000 genomes]
rs136352	0.82[EUR][1000 genomes]
rs5997763	0.86[EUR][1000 genomes]
rs73154645	1.00[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs73154674	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915818	chr22:30708245-31346302	Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:31173800-31198200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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