Variant report

Variant	rs73158357
Chromosome Location	chr7:147104159-147104160
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10500186	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12155219	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12531630	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12532315	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12538269	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13229513	0.95[ASN][1000 genomes]
rs1404700	0.81[ASN][1000 genomes]
rs1404701	0.82[ASN][1000 genomes]
rs1528529	0.85[ASN][1000 genomes]
rs17170498	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1871491	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34784405	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4142824	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4621717	0.83[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs62481222	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9648846	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147095400-147120800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:147097800-147107600	Weak transcription	NHDF-Ad	bronchial
3	chr7:147098800-147107800	Weak transcription	Osteobl	bone
4	chr7:147103200-147104200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr7:147103200-147104200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr7:147103200-147104200	Enhancers	Muscle Satellite Cultured Cells	--
7	chr7:147103600-147104200	Enhancers	HSMM	muscle
8	chr7:147103600-147104200	Enhancers	HSMMtube	muscle
9	chr7:147103800-147104200	Enhancers	Fetal Kidney	kidney
10	chr7:147103800-147107600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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