Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10225284	0.82[EUR][1000 genomes]
rs10254439	0.91[ASN][1000 genomes]
rs10262321	0.91[ASN][1000 genomes]
rs10279739	0.82[EUR][1000 genomes]
rs1819966	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28583294	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55674993	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55794944	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55935714	0.93[EUR][1000 genomes]
rs56093444	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56199969	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56346792	0.95[EUR][1000 genomes]
rs62488633	0.82[EUR][1000 genomes]
rs73157989	0.90[EUR][1000 genomes]
rs73159924	0.82[EUR][1000 genomes]
rs73159932	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73162206	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7457099	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7778666	0.95[EUR][1000 genomes]
rs7795366	0.95[EUR][1000 genomes]
rs7803387	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34048	chr7:137724092-138213119	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
2	nsv831152	chr7:137884311-138033117	Flanking Active TSS Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv5967	chr7:137988239-138015844	Flanking Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137995200-138012000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr7:138006200-138012400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:138010000-138012400	Weak transcription	Fetal Heart	heart
4	chr7:138010000-138012400	Weak transcription	Placenta	Placenta
5	chr7:138010400-138012400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr7:138011400-138011600	Enhancers	HepG2	liver
7	chr7:138011400-138013600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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