Variant report

Variant	rs73160612
Chromosome Location	chr3:157310858-157310859
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs11508696	0.96[EUR][1000 genomes]
rs1596343	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1596346	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1596347	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1596348	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs16827846	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17406704	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1822395	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1822397	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1838140	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2218357	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4299437	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs56978441	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57302345	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57402090	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs58228461	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60053317	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60056712	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs66492295	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs66507550	0.86[EUR][1000 genomes]
rs66590639	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs66677173	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs66748594	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs66920133	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs67109050	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67214719	0.86[EUR][1000 genomes]
rs67317271	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs67342635	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs67400547	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs67679572	0.84[EUR][1000 genomes]
rs67835528	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs67962803	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67990725	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs68073943	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs73015531	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73158534	1.00[AFR][1000 genomes]
rs73158545	1.00[AFR][1000 genomes]
rs73158547	1.00[AFR][1000 genomes]
rs73158549	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73158550	1.00[AFR][1000 genomes]
rs73158551	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73158557	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73158575	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs73158591	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs73160604	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73160606	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73160607	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73160608	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7649021	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829767	chr3:157306411-157490444	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157308600-157312200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr3:157309000-157312200	Weak transcription	Adipose Nuclei	Adipose
3	chr3:157309800-157311000	Enhancers	Fetal Lung	lung

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