Variant report

Variant	rs73168442
Chromosome Location	chr5:89073759-89073760
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs59535168	1.00[AMR][1000 genomes]
rs73168421	1.00[AMR][1000 genomes]
rs73172368	1.00[AMR][1000 genomes]
rs73178585	1.00[AMR][1000 genomes]
rs73178732	1.00[AMR][1000 genomes]
rs73178754	1.00[AMR][1000 genomes]
rs73180765	1.00[AMR][1000 genomes]
rs73182709	1.00[AMR][1000 genomes]
rs73182738	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830390	chr5:89054602-89236583	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:89073400-89073800	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr5:89073400-89074400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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