The 2.0 version of rSNPBase

Variant report

Variant rs73172306
Chromosome Location chr21:16361407-16361408
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:16340600-16367400 Weak transcription NHDF-Ad bronchial
2 chr21:16340600-16372800 Weak transcription GM12878-XiMat blood
3 chr21:16340600-16374200 Weak transcription Aorta Aorta
4 chr21:16340600-16375800 Weak transcription Right Ventricle heart
5 chr21:16340800-16362600 Weak transcription Thymus Thymus
6 chr21:16340800-16362800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr21:16340800-16363000 Weak transcription Muscle Satellite Cultured Cells --
8 chr21:16340800-16363200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr21:16340800-16363200 Weak transcription Psoas Muscle Psoas
10 chr21:16340800-16368000 Weak transcription HUVEC blood vessel
11 chr21:16340800-16368200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr21:16340800-16368600 Weak transcription Esophagus oesophagus
13 chr21:16340800-16373400 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr21:16340800-16374400 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr21:16340800-16375800 Weak transcription Gastric stomach
16 chr21:16340800-16375800 Weak transcription Lung lung
17 chr21:16340800-16377600 Weak transcription Stomach Smooth Muscle stomach
18 chr21:16341200-16388600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr21:16341600-16377000 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr21:16342000-16362400 Weak transcription NHLF lung
21 chr21:16347600-16364600 Weak transcription Fetal Intestine Small intestine
22 chr21:16350600-16361600 Weak transcription Rectal Smooth Muscle rectum
23 chr21:16352800-16368600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr21:16354000-16368600 Weak transcription Spleen Spleen
25 chr21:16356400-16363400 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr21:16356600-16362200 Strong transcription Primary hematopoietic stem cells blood
27 chr21:16356800-16367000 Weak transcription NH-A brain
28 chr21:16357000-16368600 Weak transcription Fetal Kidney kidney
29 chr21:16358600-16361800 Strong transcription Rectal Mucosa Donor 29 rectum
30 chr21:16358600-16362000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr21:16358600-16364800 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr21:16358800-16361800 Enhancers HUES6 Cell Line embryonic stem cell
33 chr21:16358800-16377600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr21:16359200-16361800 Enhancers iPS-15b Cell Line embryonic stem cell
35 chr21:16359200-16363400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr21:16359200-16364600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr21:16359200-16364600 Strong transcription Liver Liver
38 chr21:16359400-16361600 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
39 chr21:16359400-16361600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr21:16359400-16362000 Strong transcription Primary monocytes fromperipheralblood blood
41 chr21:16359400-16363200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr21:16359400-16363600 Strong transcription Rectal Mucosa Donor 31 rectum
43 chr21:16359400-16364200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr21:16359600-16361600 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr21:16359600-16361600 Strong transcription A549 lung
46 chr21:16359600-16362000 Strong transcription Primary T cells from cord blood blood
47 chr21:16359600-16362000 Strong transcription Colonic Mucosa Colon
48 chr21:16359600-16363800 Strong transcription Dnd41 blood
49 chr21:16359600-16364200 Strong transcription NHEK skin
50 chr21:16359600-16365000 Strong transcription Fetal Thymus thymus

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Last update: Aug 31, 2015