Variant report

Variant	rs73176072
Chromosome Location	chr12:103437130-103437131
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs12422530	1.00[ASN][1000 genomes]
rs4764931	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4764932	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73176071	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899475	chr12:103353538-103474068	Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103435800-103437400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
2	chr12:103436000-103437200	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr12:103436200-103437400	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr12:103436400-103438600	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr12:103436600-103437400	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr12:103436800-103437400	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr12:103436800-103437400	Enhancers	HUES64 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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