Variant report

Variant	rs73186351
Chromosome Location	chr13:51449467-51449468
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs73186349	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73186350	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73186353	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73186356	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9316510	0.94[EUR][1000 genomes]
rs9526702	0.89[EUR][1000 genomes]
rs9563009	0.84[EUR][1000 genomes]
rs9568485	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9568487	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9568488	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9568489	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2753492	chr13:50550081-51461720	Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1256 gene(s)	inside rSNPs	diseases
2	nsv526999	chr13:51440933-51452751	Enhancers Weak transcription	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv900077	chr13:51446114-51514831	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:51442800-51449800	Weak transcription	Dnd41	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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