Variant report

Variant	rs73195765
Chromosome Location	chr8:8840878-8840879
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:8838685..8840996-chr8:8844587..8846741,2	MCF-7	breast:
2	chr8:8833155..8834803-chr8:8839283..8842005,2	K562	blood:

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs1036081	0.84[EUR][1000 genomes]
rs12677456	0.81[EUR][1000 genomes]
rs12681075	0.88[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs12682403	0.86[EUR][1000 genomes]
rs17155071	0.83[EUR][1000 genomes]
rs28693452	0.84[EUR][1000 genomes]
rs35076339	0.86[EUR][1000 genomes]
rs4433148	0.86[EUR][1000 genomes]
rs4551361	0.86[EUR][1000 genomes]
rs4601317	0.86[EUR][1000 genomes]
rs4636210	0.83[EUR][1000 genomes]
rs4841080	0.80[EUR][1000 genomes]
rs55654856	0.84[EUR][1000 genomes]
rs57552272	0.84[EUR][1000 genomes]
rs58254294	0.84[EUR][1000 genomes]
rs58604216	0.84[EUR][1000 genomes]
rs60664964	0.89[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs67831654	0.86[EUR][1000 genomes]
rs68132987	0.84[EUR][1000 genomes]
rs68159296	0.83[EUR][1000 genomes]
rs6983008	0.84[EUR][1000 genomes]
rs6983030	0.84[EUR][1000 genomes]
rs6983503	0.84[EUR][1000 genomes]
rs6983504	0.84[EUR][1000 genomes]
rs6987223	0.84[EUR][1000 genomes]
rs6990532	0.86[EUR][1000 genomes]
rs6992896	0.84[EUR][1000 genomes]
rs7001457	0.83[EUR][1000 genomes]
rs7006526	0.84[EUR][1000 genomes]
rs7006798	0.86[EUR][1000 genomes]
rs7007290	0.86[EUR][1000 genomes]
rs7010628	0.84[AFR][1000 genomes]
rs7012685	0.81[EUR][1000 genomes]
rs7012954	0.86[EUR][1000 genomes]
rs7012984	0.84[EUR][1000 genomes]
rs73195758	0.97[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs73195769	0.95[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs73195777	0.95[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73195780	0.84[EUR][1000 genomes]
rs73518370	0.84[EUR][1000 genomes]
rs9644673	0.97[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9644696	0.98[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890331	chr8:8093240-8971100	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
2	nsv995047	chr8:8353662-8857913	Bivalent/Poised TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
3	nsv917117	chr8:8621658-9313799	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
4	nsv831229	chr8:8751523-8926235	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
5	nsv610205	chr8:8799111-8891644	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:8840200-8841000	Enhancers	GM12878-XiMat	blood
2	chr8:8840600-8841000	Enhancers	Primary B cells from peripheral blood	blood

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