Variant report

Variant	rs73230952
Chromosome Location	chr4:15334159-15334160
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11724613	1.00[AFR][1000 genomes]
rs62289303	1.00[AFR][1000 genomes]
rs62289343	1.00[AFR][1000 genomes]
rs62409355	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3448986	chr4:14928802-15805558	Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:15325400-15339000	Weak transcription	Primary B cells from cord blood	blood
2	chr4:15329600-15335600	Weak transcription	Placenta	Placenta
3	chr4:15329800-15334400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr4:15329800-15336200	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr4:15330000-15334600	Weak transcription	Fetal Muscle Leg	muscle
6	chr4:15330000-15335200	Weak transcription	Fetal Lung	lung
7	chr4:15330000-15341200	Weak transcription	Ovary	ovary
8	chr4:15330200-15338000	Weak transcription	Osteobl	bone
9	chr4:15331000-15335200	Weak transcription	NHLF	lung
10	chr4:15333400-15334200	Enhancers	Adipose Nuclei	Adipose
11	chr4:15333600-15334400	Enhancers	HSMM	muscle
12	chr4:15333600-15334600	Enhancers	HSMMtube	muscle
13	chr4:15333600-15335000	Enhancers	Fetal Stomach	stomach
14	chr4:15333600-15335200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr4:15333600-15335400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr4:15333800-15334200	Weak transcription	Aorta	Aorta
17	chr4:15334000-15336600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr4:15334000-15341200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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