Variant report

Variant	rs73236015
Chromosome Location	chr3:141845306-141845307
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr3:141845160-141845310	SAEC	small airway:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
2	RAD21	chr3:141844997-141845424	Hela-S3	cervix:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
3	RAD21	chr3:141845028-141845442	H1-hESC	embryonic stem cell:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
4	CTCF	chr3:141845180-141845330	GM12867	blood:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
5	RAD21	chr3:141845035-141845397	K562	blood:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
6	CTCF	chr3:141845062-141845346	Medullo	brain:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
7	CTCF	chr3:141845240-141845390	HFF-Myc	foreskin:	n/a	n/a
8	ZNF143	chr3:141845080-141845344	K562	blood:	n/a	n/a
9	RAD21	chr3:141844999-141845425	IMR90	lung:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
10	TBL1XR1	chr3:141845101-141845373	K562	blood:	n/a	n/a
11	CTCF	chr3:141845180-141845330	NHEK	skin:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
12	CTCF	chr3:141844969-141845375	A549	lung:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
13	RAD21	chr3:141844890-141845489	MCF-7	breast:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
14	RAD21	chr3:141845059-141845466	HepG2	liver:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
15	RAD21	chr3:141845070-141845397	GM12878	blood:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
16	RAD21	chr3:141844928-141845483	H1-hESC	embryonic stem cell:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
17	CTCF	chr3:141845180-141845330	HCM	heart:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
18	ARID3A	chr3:141845145-141845331	HepG2	liver:	n/a	n/a
19	CTCF	chr3:141845110-141845333	SK-N-SH_RA	brain:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
20	CTCF	chr3:141845079-141845310	Gliobla	brain:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
21	RAD21	chr3:141845108-141845461	K562	blood:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
22	CTCF	chr3:141845103-141845387	H1-hESC	embryonic stem cell:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
23	CTCF	chr3:141845160-141845310	NHDF-neo	bronchial:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
24	RAD21	chr3:141845045-141845346	H1-hESC	embryonic stem cell:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
25	CTCF	chr3:141845067-141845324	Spleen_OC	spleen:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
26	CTCF	chr3:141845160-141845310	GM06990	blood:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
27	CTCF	chr3:141845160-141845310	HRPEpiC	eye:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
28	CTCF	chr3:141845061-141845371	A549	lung:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
29	CTCF	chr3:141845121-141845317	GM10266	blood:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
30	CTCF	chr3:141845160-141845310	K562	blood:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
31	CTCF	chr3:141845160-141845310	GM12878	blood:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
32	CTCF	chr3:141845160-141845310	HCPEpiC	choroid plexus:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
33	CTCF	chr3:141845220-141845370	HFF-Myc	foreskin:	n/a	n/a
34	RAD21	chr3:141844922-141845551	HCT-116	colon:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
35	CTCF	chr3:141845160-141845310	HPAF	blood vessel:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
36	CTCF	chr3:141845180-141845330	GM12871	blood:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
37	SMC3	chr3:141845027-141845426	Hela-S3	cervix:	n/a	chr3:141845206-141845220
38	CTCF	chr3:141845096-141845389	K562	blood:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
39	RAD21	chr3:141845099-141845393	SK-N-SH_RA	brain:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
40	SMC3	chr3:141845047-141845401	GM12878	blood:	n/a	chr3:141845206-141845220
41	IRF1	chr3:141845185-141845432	K562	blood:	n/a	n/a
42	CTCF	chr3:141845140-141845329	Pancreas_OC	pancreas:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
43	CTCF	chr3:141845160-141845310	AG04449	skin:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
44	CTCF	chr3:141845160-141845310	HUVEC	blood vessel:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
45	RAD21	chr3:141844805-141845678	SK-N-SH	brain:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
46	RAD21	chr3:141844947-141845451	HCT-116	colon:	n/a	chr3:141845205-141845224 chr3:141845206-141845220
47	CTCF	chr3:141845160-141845310	HCFaa	heart:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
48	CTCF	chr3:141845160-141845310	HCT-116	colon:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
49	CTCF	chr3:141845160-141845310	GM12875	blood:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227
50	CTCF	chr3:141845160-141845310	HMF	breast:	n/a	chr3:141845204-141845222 chr3:141845205-141845221 chr3:141845206-141845227

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:109101906..109102754-chr3:141844774..141845667,2	K562	blood:
2	chr3:141845245..141847377-chr3:141943504..141945242,2	MCF-7	breast:

Variant related genes	Relation type
TFDP2	TF binding region
ENSG00000162636	Chromatin interaction
ENSG00000175066	Chromatin interaction

Extended variants
information (count: 68 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs12107150	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2203002	1.00[ASN][1000 genomes]
rs34280182	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57008447	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57411138	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58436159	1.00[ASN][1000 genomes]
rs62282060	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62282062	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62282063	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62284579	0.80[AFR][1000 genomes]
rs6768243	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6771905	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6775615	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6775838	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs73236023	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:53 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949709	chr3:141295050-142178144	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
2	nsv1013352	chr3:141541105-141870293	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
3	nsv1002446	chr3:141719169-142070290	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
4	esv2757892	chr3:141728870-142129836	Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
5	esv2759182	chr3:141728870-142129836	Enhancers Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
6	esv2757013	chr3:141756541-142094631	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
7	nsv1002123	chr3:141789746-141956778	Weak transcription Strong transcription Genic enhancers Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
8	nsv536733	chr3:141789746-141956778	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
9	nsv1004784	chr3:141789746-142070290	Enhancers Flanking Active TSS Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
10	nsv460872	chr3:141812759-141984638	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
11	nsv591911	chr3:141812759-141984638	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
12	nsv591912	chr3:141812759-142071932	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
13	nsv522549	chr3:141812759-142164735	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
14	nsv999975	chr3:141818850-142086659	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
15	nsv520523	chr3:141818850-142110818	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
16	nsv1008873	chr3:141820933-141994542	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
17	nsv999250	chr3:141820933-142077131	Strong transcription Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
18	nsv1008179	chr3:141820933-142078977	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
19	nsv998076	chr3:141820933-142086659	Weak transcription ZNF genes & repeats Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
20	nsv1009715	chr3:141820933-142091461	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
21	esv2763767	chr3:141820945-142101554	Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
22	nsv1005216	chr3:141821448-142086659	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
23	nsv1001411	chr3:141822389-142084056	Active TSS Flanking Active TSS Strong transcription Enhancers Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
24	nsv536734	chr3:141822389-142084056	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
25	nsv997929	chr3:141822390-142084057	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
26	nsv536735	chr3:141822390-142084057	Genic enhancers Bivalent Enhancer Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
27	nsv1006922	chr3:141822589-142078726	Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
28	nsv536736	chr3:141822589-142078726	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
29	nsv997293	chr3:141822589-142083917	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
30	nsv536737	chr3:141822589-142083917	Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
31	nsv460874	chr3:141822621-141984638	Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
32	nsv591913	chr3:141822621-141984638	Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
33	nsv460875	chr3:141822621-142071932	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
34	nsv460876	chr3:141822621-142071932	Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
35	nsv591914	chr3:141822621-142071932	Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
36	nsv1001553	chr3:141824647-142063279	Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
37	nsv1007508	chr3:141824647-142078977	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
38	nsv1000703	chr3:141824647-142086659	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
39	nsv1011883	chr3:141824744-142070290	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
40	nsv536738	chr3:141824744-142070290	Flanking Active TSS Active TSS Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
41	nsv1003615	chr3:141829926-142086659	Strong transcription Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
42	nsv1010416	chr3:141831727-142084056	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
43	nsv536739	chr3:141831727-142084056	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
44	nsv1001521	chr3:141831728-142078866	Enhancers Strong transcription Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
45	nsv536740	chr3:141831728-142078866	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
46	nsv1005623	chr3:141831728-142084057	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
47	nsv536741	chr3:141831728-142084057	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
48	nsv1008964	chr3:141831927-142078726	Weak transcription Active TSS Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
49	nsv536742	chr3:141831927-142078726	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
50	nsv1011946	chr3:141831927-142083917	Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:141836200-141845400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr3:141836400-141866200	Weak transcription	Primary T cells from cord blood	blood
3	chr3:141836600-141847200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr3:141837200-141847200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr3:141838200-141866200	Weak transcription	Adipose Nuclei	Adipose
6	chr3:141838600-141850600	Weak transcription	Fetal Intestine Small	intestine
7	chr3:141840200-141865400	Weak transcription	Brain Hippocampus Middle	brain
8	chr3:141840200-141866000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr3:141842800-141858400	Weak transcription	Fetal Intestine Large	intestine
10	chr3:141843200-141846000	Enhancers	Dnd41	blood
11	chr3:141844800-141859600	Weak transcription	Fetal Stomach	stomach
12	chr3:141845000-141863600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr3:141845200-141845600	Enhancers	Thymus	Thymus
14	chr3:141845200-141846400	Enhancers	Fetal Thymus	thymus
15	chr3:141845200-141847400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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