Variant report

Variant	rs73236057
Chromosome Location	chr3:141869216-141869217
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr3:141869171-141869320	MCF-7	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:141869138..141873341-chr3:141874948..141878227,4	MCF-7	breast:
2	chr3:141456676..141459122-chr3:141866884..141869547,2	MCF-7	breast:
3	chr3:141866471..141869350-chr3:141942355..141944493,2	K562	blood:
4	chr3:141863639..141867822-chr3:141868615..141873401,6	K562	blood:

Variant related genes	Relation type
TFDP2	TF binding region
ENSG00000114125	Chromatin interaction
ENSG00000206604	Chromatin interaction
ENSG00000175066	Chromatin interaction

Extended variants
information (count: 183 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:127)

rs_ID	r²[population]
rs11706051	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11706152	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11708011	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11711239	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11711372	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11711550	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11712148	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11713062	0.81[EUR][1000 genomes]
rs11713191	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11714396	1.00[AFR][1000 genomes]
rs11715339	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11715450	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11716764	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11717306	0.81[EUR][1000 genomes]
rs11719151	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11719806	0.81[EUR][1000 genomes]
rs11721121	1.00[AFR][1000 genomes]
rs13086211	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13086954	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1877047	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34262349	0.81[EUR][1000 genomes]
rs35250413	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4683419	0.81[EUR][1000 genomes]
rs4683422	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4683665	0.81[EUR][1000 genomes]
rs4683669	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4683670	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4683673	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4683674	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4683675	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4683676	1.00[AFR][1000 genomes]
rs55633822	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55680729	0.81[EUR][1000 genomes]
rs55781914	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55787733	0.81[EUR][1000 genomes]
rs55814508	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55825152	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55828926	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55838256	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55866605	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55871523	0.81[EUR][1000 genomes]
rs55881752	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55884097	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55926409	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs55959014	0.81[EUR][1000 genomes]
rs56008466	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56080851	0.94[EUR][1000 genomes]
rs56116145	0.81[EUR][1000 genomes]
rs56132950	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56163066	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56180811	0.91[EUR][1000 genomes]
rs56200713	0.81[EUR][1000 genomes]
rs56291098	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56300836	0.81[EUR][1000 genomes]
rs56376383	0.81[ASN][1000 genomes]
rs56414145	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs57156169	0.81[EUR][1000 genomes]
rs60528783	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73232663	0.81[EUR][1000 genomes]
rs73232664	0.81[EUR][1000 genomes]
rs73232666	0.81[EUR][1000 genomes]
rs73232672	0.81[EUR][1000 genomes]
rs73232673	0.81[EUR][1000 genomes]
rs73232674	0.81[EUR][1000 genomes]
rs73232675	0.81[EUR][1000 genomes]
rs73232677	0.81[EUR][1000 genomes]
rs73232678	0.81[EUR][1000 genomes]
rs73232684	0.81[EUR][1000 genomes]
rs73232685	0.81[EUR][1000 genomes]
rs73232688	0.81[EUR][1000 genomes]
rs73232693	0.81[EUR][1000 genomes]
rs73232695	0.81[EUR][1000 genomes]
rs73233851	0.81[EUR][1000 genomes]
rs73233852	0.81[EUR][1000 genomes]
rs73233853	0.81[EUR][1000 genomes]
rs73233879	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233880	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233881	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233883	0.88[EUR][1000 genomes]
rs73233885	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233886	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233887	0.91[EUR][1000 genomes]
rs73233888	0.91[EUR][1000 genomes]
rs73233890	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233891	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233892	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233893	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233895	0.91[EUR][1000 genomes]
rs73233896	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233897	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233898	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233900	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73233902	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236004	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236005	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236007	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236009	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236012	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236013	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236016	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236018	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236030	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236032	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236033	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236034	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236038	0.99[EUR][1000 genomes]
rs73236039	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236040	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236042	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236043	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236044	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236046	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236047	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236048	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236049	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236050	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236052	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236053	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73236054	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236055	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236056	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236058	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236065	1.00[AFR][1000 genomes]
rs73236067	1.00[AFR][1000 genomes]
rs73236071	1.00[AFR][1000 genomes]
rs73236072	1.00[AFR][1000 genomes]
rs73236075	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:56 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949709	chr3:141295050-142178144	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
2	nsv1013352	chr3:141541105-141870293	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
3	nsv1002446	chr3:141719169-142070290	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
4	esv2757892	chr3:141728870-142129836	Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
5	esv2759182	chr3:141728870-142129836	Enhancers Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
6	esv2757013	chr3:141756541-142094631	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
7	nsv1002123	chr3:141789746-141956778	Weak transcription Strong transcription Genic enhancers Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
8	nsv536733	chr3:141789746-141956778	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
9	nsv1004784	chr3:141789746-142070290	Enhancers Flanking Active TSS Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
10	nsv460872	chr3:141812759-141984638	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
11	nsv591911	chr3:141812759-141984638	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
12	nsv591912	chr3:141812759-142071932	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
13	nsv522549	chr3:141812759-142164735	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
14	nsv999975	chr3:141818850-142086659	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
15	nsv520523	chr3:141818850-142110818	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
16	nsv1008873	chr3:141820933-141994542	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
17	nsv999250	chr3:141820933-142077131	Strong transcription Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
18	nsv1008179	chr3:141820933-142078977	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
19	nsv998076	chr3:141820933-142086659	Weak transcription ZNF genes & repeats Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
20	nsv1009715	chr3:141820933-142091461	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
21	esv2763767	chr3:141820945-142101554	Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
22	nsv1005216	chr3:141821448-142086659	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
23	nsv1001411	chr3:141822389-142084056	Active TSS Flanking Active TSS Strong transcription Enhancers Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
24	nsv536734	chr3:141822389-142084056	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
25	nsv997929	chr3:141822390-142084057	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
26	nsv536735	chr3:141822390-142084057	Genic enhancers Bivalent Enhancer Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
27	nsv1006922	chr3:141822589-142078726	Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
28	nsv536736	chr3:141822589-142078726	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
29	nsv997293	chr3:141822589-142083917	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
30	nsv536737	chr3:141822589-142083917	Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
31	nsv460874	chr3:141822621-141984638	Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
32	nsv591913	chr3:141822621-141984638	Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
33	nsv460875	chr3:141822621-142071932	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
34	nsv460876	chr3:141822621-142071932	Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
35	nsv591914	chr3:141822621-142071932	Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
36	nsv1001553	chr3:141824647-142063279	Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
37	nsv1007508	chr3:141824647-142078977	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
38	nsv1000703	chr3:141824647-142086659	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
39	nsv1011883	chr3:141824744-142070290	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
40	nsv536738	chr3:141824744-142070290	Flanking Active TSS Active TSS Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
41	nsv1003615	chr3:141829926-142086659	Strong transcription Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
42	nsv1010416	chr3:141831727-142084056	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
43	nsv536739	chr3:141831727-142084056	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
44	nsv1001521	chr3:141831728-142078866	Enhancers Strong transcription Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
45	nsv536740	chr3:141831728-142078866	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
46	nsv1005623	chr3:141831728-142084057	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
47	nsv536741	chr3:141831728-142084057	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
48	nsv1008964	chr3:141831927-142078726	Weak transcription Active TSS Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
49	nsv536742	chr3:141831927-142078726	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
50	nsv1011946	chr3:141831927-142083917	Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:58 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:141868600-141872800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr3:141868800-141872800	Weak transcription	HMEC	breast
3	chr3:141868800-141880000	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr3:141868800-141880200	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr3:141868800-141880400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr3:141868800-141886400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr3:141868800-141887600	Weak transcription	Primary B cells from cord blood	blood
8	chr3:141868800-141887600	Weak transcription	Primary hematopoietic stem cells	blood
9	chr3:141868800-141887600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr3:141868800-141887600	Weak transcription	Gastric	stomach
11	chr3:141868800-141887600	Weak transcription	Left Ventricle	heart
12	chr3:141868800-141887600	Weak transcription	Ovary	ovary
13	chr3:141868800-141888800	Weak transcription	Spleen	Spleen
14	chr3:141868800-141897200	Weak transcription	Hela-S3	cervix
15	chr3:141868800-141898800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr3:141868800-141902600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
17	chr3:141868800-141943000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
18	chr3:141869000-141869400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr3:141869000-141871200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr3:141869000-141871200	Weak transcription	Fetal Thymus	thymus
21	chr3:141869000-141872800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr3:141869000-141873000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr3:141869000-141877000	Weak transcription	Fetal Intestine Large	intestine
24	chr3:141869000-141879000	Weak transcription	Fetal Intestine Small	intestine
25	chr3:141869000-141879600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
26	chr3:141869000-141879600	Weak transcription	Fetal Muscle Trunk	muscle
27	chr3:141869000-141879800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr3:141869000-141879800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr3:141869000-141880000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr3:141869000-141880000	Weak transcription	Adipose Nuclei	Adipose
31	chr3:141869000-141880200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
32	chr3:141869000-141880400	Weak transcription	Duodenum Mucosa	Duodenum
33	chr3:141869000-141880400	Weak transcription	Dnd41	blood
34	chr3:141869000-141880600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr3:141869000-141882200	Weak transcription	Stomach Smooth Muscle	stomach
36	chr3:141869000-141882600	Weak transcription	Rectal Mucosa Donor 29	rectum
37	chr3:141869000-141883200	Weak transcription	Primary neutrophils fromperipheralblood	blood
38	chr3:141869000-141883200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr3:141869000-141883200	Weak transcription	Rectal Mucosa Donor 31	rectum
40	chr3:141869000-141887000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr3:141869000-141887600	Weak transcription	Primary T helper cells fromperipheralblood	blood
42	chr3:141869000-141887600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
43	chr3:141869000-141887600	Weak transcription	Brain Inferior Temporal Lobe	brain
44	chr3:141869000-141887600	Weak transcription	Esophagus	oesophagus
45	chr3:141869000-141887600	Weak transcription	Pancreas	Pancrea
46	chr3:141869000-141887800	Weak transcription	Brain Substantia Nigra	brain
47	chr3:141869000-141887800	Weak transcription	Thymus	Thymus
48	chr3:141869000-141888000	Weak transcription	Fetal Brain Female	brain
49	chr3:141869000-141888600	Weak transcription	Lung	lung
50	chr3:141869000-141888800	Weak transcription	Fetal Brain Male	brain

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