Variant report

Variant	rs73236756
Chromosome Location	chr14:36560634-36560635
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:36560154..36563074-chr14:36570402..36572579,2	K562	blood:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10145278	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12433633	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12433659	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17103955	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17103957	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17103967	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17103972	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17103988	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17104022	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17104029	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs57852889	1.00[EUR][1000 genomes]
rs7145193	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7146795	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7147273	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73236709	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73236750	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73236763	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236768	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236770	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236773	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236774	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73236778	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73249995	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73249996	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73251666	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs74044231	0.88[ASN][1000 genomes]
rs74044282	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051045	chr14:36116503-36764947	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
2	nsv542038	chr14:36116503-36764947	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
3	nsv1051147	chr14:36413342-36562863	Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv1040256	chr14:36501452-37172046	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
5	nsv542040	chr14:36501452-37172046	Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
6	nsv1041441	chr14:36545463-36756347	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
7	nsv542041	chr14:36545463-36756347	Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:36559600-36561200	Enhancers	Pancreatic Islets	Pancreatic Islet
2	chr14:36559800-36561000	Enhancers	NH-A	brain
3	chr14:36559800-36561200	Enhancers	HepG2	liver
4	chr14:36559800-36561600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr14:36560000-36561200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr14:36560200-36560800	Enhancers	Brain Anterior Caudate	brain
7	chr14:36560200-36560800	Enhancers	Fetal Kidney	kidney
8	chr14:36560200-36560800	Enhancers	Hela-S3	cervix
9	chr14:36560200-36561000	Enhancers	HMEC	breast
10	chr14:36560200-36561000	Enhancers	NHEK	skin
11	chr14:36560200-36561200	Enhancers	Stomach Mucosa	stomach
12	chr14:36560400-36560800	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr14:36560400-36560800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr14:36560400-36560800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr14:36560400-36560800	Enhancers	Aorta	Aorta
16	chr14:36560400-36560800	Enhancers	Brain Angular Gyrus	brain
17	chr14:36560400-36560800	Enhancers	Brain Inferior Temporal Lobe	brain
18	chr14:36560400-36561000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr14:36560400-36561000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr14:36560400-36561000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr14:36560600-36561000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr14:36560600-36561000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr14:36560600-36561000	Enhancers	Duodenum Mucosa	Duodenum
24	chr14:36560600-36561000	Flanking Active TSS	NHDF-Ad	bronchial
25	chr14:36560600-36561200	Flanking Active TSS	A549	lung

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